RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PLPPR2Q96GM1 343 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SAMD10Q9BYL1 202 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 EXO1Q9UQ84 846 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 SLCO1B1Q9Y6L6 691 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SLC16A6O15403 523 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 CBR3O75828 277 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 ZNF626Q68DY1 528 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SAV1Q9H4B6 383 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 TXNL4BQ9NX01 149 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 ATPIF1Q9UII2 106 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 POLDIP2Q9Y2S7 368 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 MYO5AQ9Y4I1 1855 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 TCRBV5S1A1TA0A578 114 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 FRG2CA6NGY1 282 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PAPLNO95428 1278 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SLC35D3Q5M8T2 416 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 KMT5CQ86Y97 462 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SCN9AQ15858 1988 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 WDR1O75083 606 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 CPEP16870 476 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 AADACP22760 399 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 BSGP35613 385 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 KIAA0100Q14667 2235 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 FITM1A5D6W6 292 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 TATDN3Q17R31 274 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 SYT14P1Q58G82 188 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PRAMEF5Q5TYX0 476 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PRAMEF6Q5VXH4 476 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 OR1L3Q8NH93 324 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 GNRHR2Q96P88 292 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 NT5DC2Q9H857 520 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 KCNG2Q9UJ96 466 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 NME1P15531 152 aaKnown RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 LAP3P28838 519 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
TTC28-201ENST00000397906 LYPD8Q6UX82 237 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 PRSS45Q7RTY3 260 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 OR2V1Q8NHB1 315 aa10.32□□□□□ -0.76
TTC28-201ENST00000397906 CCR6P51684 374 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 FZD2Q14332 565 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 CLDN22Q8N7P3 220 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 CADM4Q8NFZ8 388 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 OR10G3Q8NGC4 313 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 OR51A2Q8NGJ7 313 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 MVB12AQ96EY5 273 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 COL9A1P20849 921 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 DSCR4P56555 118 aaPredicted RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 ZNF718Q3SXZ3 478 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 MRGPRX4Q96LA9 322 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 PLEKHF2Q9H8W4 249 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 ARID1BQ8NFD5 2236 aaPredicted RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 CRYZL1O95825 349 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 SEMG1P04279 462 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 MPPED2Q15777 294 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 ZDHHC23Q8IYP9 409 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 OPALINQ96PE5 141 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 METTL17Q9H7H0 456 aaPredicted RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 ETHE1O95571 254 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 SPINK14Q6IE38 97 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 STEAP1BQ6NZ63 245 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 GPR84Q9NQS5 396 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 PAPPAQ13219 1627 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 MEIOCA2RUB1 952 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 UPK1AO00322 258 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 GLAP06280 429 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 HNF1AP20823 631 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 DUSP8Q13202 625 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 KDM4DQ6B0I6 523 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 LHFPL2Q6ZUX7 228 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 RAB22AQ9UL26 194 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 IGHV1OR15-9A0A0B4J2B8 117 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 TMEM81Q6P7N7 255 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 CISD2Q8N5K1 135 aaKnown RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 MRPS24Q96EL2 167 aaKnown RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 FAM173AQ9BQD7 235 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 SLC39A9Q9NUM3 307 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 TGM6O95932 706 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 ELLP55199 621 aaPredicted RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 FYTTD1Q96QD9 318 aaKnown RBP10.31□□□□□ -0.76
TTC28-201ENST00000397906 LYSMD1Q96S90 227 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 TEAD3Q99594 435 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 BCL7BQ9BQE9 202 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 PATE3B3GLJ2 98 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 SPI1P17947 270 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 ETV1P50549 477 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 SLC39A7Q92504 469 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 RNF150Q9ULK6 438 aa10.31□□□□□ -0.76
TTC28-201ENST00000397906 HLA-DOBP13765 273 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 MC2RQ01718 297 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 TMEM99Q8N816 258 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 PSORS1C1Q9UIG5 152 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 IGLV3-25P01717 112 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 HNRNPFP52597 415 aaKnown RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 THBS3P49746 956 aa10.3□□□□□ -0.76
TTC28-201ENST00000397906 TP53I13Q8NBR0 393 aaPredicted RBP10.3□□□□□ -0.76
TTC28-201ENST00000397906 E9PI62 339 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms