RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 A0A087WUU8 490 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 TRBV4-1A0A0J9YWV2 114 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ISPDA4D126 451 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 HTR3EA5X5Y0 456 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 TRAPPC2LH3BP13 241 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 E2F6O75461 281 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 FARS2O95363 451 aaKnown RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 ADH4P08319 380 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ZNF12P17014 697 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 RBMXP38159 391 aaKnown RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 MPV17P39210 176 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 WNT5AP41221 380 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 HMGA2P52926 109 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ELF3P78545 371 aaPredicted RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 ZNF154Q13106 437 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 BAMBIQ13145 260 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ATP6AP1Q15904 470 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 MOGQ16653 247 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 HIST3H3Q16695 136 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 NRN1LQ496H8 165 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 LEG1Q6P5S2 330 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 MBOAT2Q6ZWT7 520 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 DPPA2Q7Z7J5 298 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ZNF101Q8IZC7 436 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 LINC00471Q8N535 108 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 CPEB3Q8NE35 698 aaKnown RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 OR1J1Q8NGS3 322 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 SLC7A13Q8TCU3 470 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 IPCEF1Q8WWN9 437 aaPredicted RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 GPA33Q99795 319 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 RNF121Q9H920 327 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 KRCC1Q9NPI7 259 aaPredicted RBP13.59□□□□□ -0.23
CUX2-202ENST00000397643 LYVE1Q9Y5Y7 322 aa13.59□□□□□ -0.23
CUX2-202ENST00000397643 H3BNX3 289 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.24
CUX2-202ENST00000397643 PTHP01270 115 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 IGF2P01344 180 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 IGHV2-70P01814 119 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 IGHMP01871 453 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 MT-ND5P03915 603 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 QDPRP09417 244 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 MDKP21741 143 aaPredicted RBP13.58□□□□□ -0.24
CUX2-202ENST00000397643 FUT4P22083 530 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 IFNGR2P38484 337 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 ARHGDIAP52565 204 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 UGT2B15P54855 530 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 SEC61A1P61619 476 aaKnown RBP13.58□□□□□ -0.24
CUX2-202ENST00000397643 SLC9A3R2Q15599 337 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 ZNF74Q16587 644 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 SPATA46Q5T0L3 261 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 OR1J2Q8NGS2 313 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 LRTOMTQ8WZ04 291 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 MARS2Q96GW9 593 aaKnown RBP13.58□□□□□ -0.24
CUX2-202ENST00000397643 INSIG2Q9Y5U4 225 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 AUP1Q9Y679 476 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 U3KQV3 271 aa13.58□□□□□ -0.24
CUX2-202ENST00000397643 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 CCNB2O95067 398 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 SLC3A1Q07837 685 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 TBPL2Q6SJ96 375 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 NRMQ8IXM6 262 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 PFN4Q8NHR9 129 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 SLC25A28Q96A46 364 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 SGTBQ96EQ0 304 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
CUX2-202ENST00000397643 FUZQ9BT04 418 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 MEPEQ9NQ76 525 aaPredicted RBP13.57□□□□□ -0.24
CUX2-202ENST00000397643 VNN3Q9NY84 501 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 TMEM5Q9Y2B1 443 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 NPTNQ9Y639 398 aa13.57□□□□□ -0.24
CUX2-202ENST00000397643 SOX21Q9Y651 276 aaPredicted RBP13.57□□□□□ -0.24
CUX2-202ENST00000397643 A8MXK9 166 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 OR10H3O60404 316 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 BAG2O95816 211 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 CH25HO95992 272 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 CD55P08174 381 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 IFI30P13284 250 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 GCH1P30793 250 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 APLNRP35414 380 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 PRKCDQ05655 676 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 SRSF4Q08170 494 aaKnown RBP13.56□□□□□ -0.24
CUX2-202ENST00000397643 PPP1R8Q12972 351 aaKnown RBP13.56□□□□□ -0.24
CUX2-202ENST00000397643 SEC23BQ15437 767 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 MICAQ29983 383 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
CUX2-202ENST00000397643 RFPL4BQ6ZWI9 263 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 AMIGO2Q86SJ2 522 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 SLC25A40Q8TBP6 338 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 KLF14Q8TD94 323 aaPredicted RBP13.56□□□□□ -0.24
CUX2-202ENST00000397643 MCHR2Q969V1 340 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 BPIFA2Q96DR5 249 aa13.56□□□□□ -0.24
CUX2-202ENST00000397643 NRBF2Q96F24 287 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms