RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TCEAL4Q96EI5 215 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 SGTBQ96EQ0 304 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF385AQ96PM9 386 aaKnown RBP5.81□□□□□ -1.48
SMCO1-201ENST00000397537 CSF3RQ99062 836 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 RNF2Q99496 336 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 FZD3Q9NPG1 666 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 OLFML3Q9NRN5 406 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 PAK1IP1Q9NWT1 392 aaPredicted RBP5.81□□□□□ -1.48
SMCO1-201ENST00000397537 OPN4Q9UHM6 478 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 COPS3Q9UNS2 423 aa5.81□□□□□ -1.48
SMCO1-201ENST00000397537 LRRC37AA6NMS7 1700 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 PSME4Q14997 1843 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 FAM231BA6NCW3 169 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 SIGLEC5O15389 551 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MAGEB4O15481 346 aaPredicted RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 IFNA2P01563 188 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ZDHHC11BP0C7U3 371 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 GM2AP17900 193 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 COMTP21964 271 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 GNLYP22749 145 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ME2P23368 584 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 LMO1P25800 156 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 RAB40BQ12829 278 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MFAP5Q13361 173 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 OXA1LQ15070 435 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 TRIP13Q15645 432 aaPredicted RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 TOMM34Q15785 309 aaPredicted RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 LRRC26Q2I0M4 334 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 PIK3CD-AS1Q5SR53 167 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 OR2G6Q5TZ20 316 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ANKRD26P1Q6NSI1 321 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 TTLL10Q6ZVT0 673 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 SSX7Q7RTT5 188 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 IQCF1Q8N6M8 205 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MAPKAPK5-AS1Q8N8E1 139 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ACBD4Q8NC06 268 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 LFNGQ8NES3 379 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 DYNC2LI1Q8TCX1 351 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MAFIPQ8WZ33 124 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 S100PBPQ96BU1 408 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 FLYWCH2Q96CP2 140 aaKnown RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MRPL48Q96GC5 212 aaKnown RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ITCHQ96J02 903 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 RITA1Q96K30 269 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ING2Q9H160 280 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 NHEJ1Q9H9Q4 299 aaPredicted RBP5.8□□□□□ -1.48
SMCO1-201ENST00000397537 BTNL2Q9UIR0 455 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ST6GALNAC2Q9UJ37 374 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 PPP2R2CQ9Y2T4 447 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 PAM16Q9Y3D7 125 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 MYH7P12883 1935 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 NID2Q14112 1375 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
SMCO1-201ENST00000397537 REV3LO60673 3130 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 A0A1B0GVI7 797 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 HSD17B6O14756 317 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 SLC16A4O15374 487 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 PPIHO43447 177 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 TGOLN2O43493 480 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 WDR1O75083 606 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 MPZL1O95297 269 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 RHOCP08134 193 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 MYOGP15173 224 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 NR4A1P22736 598 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 RPL4P36578 427 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 AVPR1BP47901 424 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 DNA2P51530 1060 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 DLX5P56178 289 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 DGCR2P98153 550 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF45Q02386 682 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 TFF2Q03403 129 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 TLE4Q04727 773 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 PDIA2Q13087 525 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 KRR1Q13601 381 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 INPP5JQ15735 1006 aaPredicted RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 RBM48Q5RL73 367 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 LCLAT1Q6UWP7 414 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 CCNI2Q6ZMN8 369 aaPredicted RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF730Q6ZMV8 503 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 WDFY1Q8IWB7 410 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 OR2V1Q8NHB1 315 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ACTRT1Q8TDG2 376 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 CXorf40AQ8TE69 158 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 FAM172AQ8WUF8 416 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 SIGLEC10Q96LC7 697 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 WFIKKN1Q96NZ8 548 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 BBC3Q96PG8 261 aaPredicted RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 TUBB1Q9H4B7 451 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ZCCHC4Q9H5U6 513 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ARMC7Q9H6L4 198 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 GAREM1Q9H706 876 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 CCDC59Q9P031 241 aaKnown RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 ZNF337Q9Y3M9 751 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 OARD1Q9Y530 152 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 STYXL1Q9Y6J8 313 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 COL1A1P02452 1464 aaPredicted RBP5.79□□□□□ -1.48
SMCO1-201ENST00000397537 MYO9BQ13459 2157 aa5.79□□□□□ -1.48
SMCO1-201ENST00000397537 XIRP2A4UGR9 3374 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms