RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CHST11Q9NPF2 352 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 EXOSC3Q9NQT5 275 aaKnown RBP9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 UBQLN2Q9UHD9 624 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 PCNX3Q9H6A9 2034 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 TMEM272A0A1B0GTI8 110 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF254O75437 659 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 PMPCAQ10713 525 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 CLPPQ16740 277 aaPredicted RBP9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 FNDC7Q5VTL7 733 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 CPEB2Q7Z5Q1 589 aaKnown RBP9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR10K1Q8NGX5 313 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 MAFIPQ8WZ33 124 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 C7orf50Q9BRJ6 194 aaKnown RBP9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 DKKL1Q9UK85 242 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 MAB21L2Q9Y586 359 aa9.35□□□□□ -0.91
CPSF1P1-201ENST00000397477 RALGAPA1Q6GYQ0 2036 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 PRRC2CQ9Y520 2896 aaKnown RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNHIT1O43257 154 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 IGLV3-19P01714 112 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CCL4P13236 92 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 KLK2P20151 261 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 GMFBP60983 142 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RIN1Q13671 783 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 EXOSC2Q13868 293 aaKnown RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RNASE10Q5GAN6 216 aaKnown RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 NKAPLQ5M9Q1 402 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 LCN10Q6JVE6 187 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 ZNF574Q6ZN55 896 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RHOUQ7L0Q8 258 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 FAM219AQ8IW50 185 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 SLC22A8Q8TCC7 542 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RNF128Q8TEB7 428 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 PGAM5Q96HS1 289 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 GPX7Q96SL4 187 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 C19orf25Q9UFG5 118 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 IGKV3D-11A0A0A0MRZ8 115 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 C9J4A7 227 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 XRCC3O43542 346 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 HTR3BO95264 441 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CSF1P09603 554 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CCNOP22674 350 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 PRKACBP22694 351 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 EPHA4P54764 986 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CLDN6P56747 220 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 OPCMLQ14982 345 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RBMS2Q15434 407 aaKnown RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 SFRP5Q5T4F7 317 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 HACD4Q5VWC8 232 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 UNQ9370/PRO34162Q6UXP9 181 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 ANGPTL5Q86XS5 388 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 MAFAQ8NHW3 353 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 ASB5Q8WWX0 329 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 MNTQ99583 582 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 POFUT1Q9H488 388 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 FRYLO94915 3013 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 A0A1W2PQM1 296 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 NAP1L6A6NFF2 107 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 A6NIZ1 184 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CRTAPO75718 401 aaPredicted RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 IGHV3-9P01782 118 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RAF1P04049 648 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 GNB3P16520 340 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 PI3P19957 117 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RAP1BP61224 184 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RAP1AP62834 184 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 MFAP5Q13361 173 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 FAM209AQ5JX71 171 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 C9orf135Q5VTT2 229 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 OGFOD3Q6PK18 319 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 CFAP77Q6ZQR2 320 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 RFPL4BQ6ZWI9 263 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 TRAPPC6BQ86SZ2 158 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 OR52N4Q8NGI2 321 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 SFXN2Q96NB2 322 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 ST6GALNAC5Q9BVH7 336 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 C1orf198Q9H425 327 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 SPEF1Q9Y4P9 236 aa9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 MRPS18BQ9Y676 258 aaKnown RBP9.34□□□□□ -0.91
CPSF1P1-201ENST00000397477 NPIPA2E9PIF3 369 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 NPIPA3F8WFD2 350 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 NUPL2O15504 423 aaKnown RBP9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 TLX3O43711 291 aaPredicted RBP9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 ABHD16AO95870 558 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 QDPRP09417 244 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 C4BPBP20851 252 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 RFC3P40938 356 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 PER3P56645 1201 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 TNK1Q13470 666 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 MOGAT2Q3SYC2 334 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 RHBDD2Q6NTF9 364 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 TMEM81Q6P7N7 255 aa9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 ZNF704Q6ZNC4 412 aaPredicted RBP9.33□□□□□ -0.92
CPSF1P1-201ENST00000397477 BEST3Q8N1M1 668 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms