RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 RSL24D1Q9UHA3 163 aaKnown RBP13.53□□□□□ -0.24
VAMP1-202ENST00000396308 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
VAMP1-202ENST00000396308 TRBV2A0A0J9YWF9 115 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 A6NHS1 94 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 EEF1E1-BLOC1S5C9J1V9 151 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 LOC110117498-PIK3R3F6TDL0 507 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF701M0R085 212 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-202ENST00000396308 RER1O15258 196 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 EEF1E1O43324 174 aaKnown RBP13.52□□□□□ -0.25
VAMP1-202ENST00000396308 PSKH1P11801 424 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 CD79AP11912 226 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 GABRA5P31644 462 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 DCTDP32321 178 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 LIPAP38571 399 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 OPRL1P41146 370 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 CA7P43166 264 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 PLP2Q04941 152 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 CDK5R1Q15078 307 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF684Q5T5D7 378 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 PHC2Q8IXK0 858 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 RPRMLQ8N4K4 120 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.25
VAMP1-202ENST00000396308 STARD4Q96DR4 205 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 SMIM19Q96E16 107 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 YIPF6Q96EC8 236 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 MAP6Q96JE9 813 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 AMELYQ99218 206 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF629Q9UEG4 869 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-202ENST00000396308 STUB1Q9UNE7 303 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 SSR3Q9UNL2 185 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 OSGIN2Q9Y236 505 aa13.52□□□□□ -0.25
VAMP1-202ENST00000396308 A0A096LPE4 126 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 A0A1W2PPZ6 126 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MSTNO14793 375 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MAGEB4O15481 346 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 AIREO43918 545 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 GPRIN2O60269 458 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 TOXO94900 526 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ABHD16AO95870 558 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 SERPINA3P01011 423 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ITGA5P08648 1049 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 HOXB1P14653 301 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF32P17041 273 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 COX5AP20674 150 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 BMP5P22003 454 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 IGHV1-2P23083 117 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 IL32P24001 234 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 PSMB10P40306 273 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 GDI2P50395 445 aaKnown RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 SLC3A1Q07837 685 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ALKBH1Q13686 389 aaKnown RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 BCL2L15Q5TBC7 163 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ANKRD13BQ86YJ7 626 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 C17orf78Q8N4C9 275 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MS4A15Q8N5U1 240 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF283Q8N7M2 679 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 THRSPQ92748 146 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 FBXO17Q96EF6 278 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 COQ7Q99807 217 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 OPN3Q9H1Y3 402 aaPredicted RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 SP140LQ9H930 580 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 EXOSC4Q9NPD3 245 aaKnown RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 DDX28Q9NUL7 540 aaKnown RBP13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ATPIF1Q9UII2 106 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 ENPP5Q9UJA9 477 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 FBXL3Q9UKT7 428 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 MEMO1Q9Y316 297 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 R4GMQ9 66 aa13.51□□□□□ -0.25
VAMP1-202ENST00000396308 PIEZO2Q9H5I5 2752 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 FREM1Q5H8C1 2179 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 IQCMA0A1B0GVH7 501 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 OR6C6A6NF89 314 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 TMEM212A6NML5 194 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 OGG1O15527 345 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 PLPP2O43688 288 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 RAD51DO75771 328 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 LYZL6O75951 148 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 CD1AP06126 327 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 TGFBR2P37173 567 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 HTR5AP47898 357 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 PSMA6P60900 246 aaKnown RBP13.5□□□□□ -0.25
VAMP1-202ENST00000396308 HIST1H3AP68431 136 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 MTFR2Q6P444 385 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 GDPGP1Q6ZNW5 385 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 HIST2H3AQ71DI3 136 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF676Q8N7Q3 588 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF610Q8N9Z0 462 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 OR5AK2Q8NH90 309 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 ISOC1Q96CN7 298 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 KCNJ15Q99712 375 aa13.5□□□□□ -0.25
VAMP1-202ENST00000396308 TMED9Q9BVK6 235 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms