RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 LRP12Q9Y561 859 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 ZNF878C9JN71 531 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 CD1AP06126 327 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 CD36P16671 472 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 RIDAP52758 137 aaKnown RBP13.23□□□□□ -0.29
PTPN20-206ENST00000395722 CASP6P55212 293 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 SCRN3Q0VDG4 424 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 P2RY6Q15077 328 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 DMKNQ6E0U4 476 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-206ENST00000395722 RPL22L1Q6P5R6 122 aaKnown RBP13.23□□□□□ -0.29
PTPN20-206ENST00000395722 SLC16A14Q7RTX9 510 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 C1orf162Q8NEQ5 155 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-206ENST00000395722 UFD1Q92890 307 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 FAM192AQ9GZU8 254 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 PIGMQ9H3S5 423 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 SF3B6Q9Y3B4 125 aaKnown RBP13.23□□□□□ -0.29
PTPN20-206ENST00000395722 TIMM10BQ9Y5J6 103 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
PTPN20-206ENST00000395722 TRGV8A0A0C4DH27 118 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 MSTNO14793 375 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 PLPP2O43688 288 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 ZNF32P17041 273 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 CD53P19397 219 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 PSMB10P40306 273 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 TGFBR3Q03167 851 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 CDK5R1Q15078 307 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 RAB35Q15286 201 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 GABRA6Q16445 453 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 LIPKQ5VXJ0 399 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 OR7E24Q6IFN5 339 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 ZNF474Q6S9Z5 364 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-206ENST00000395722 SLC16A12Q6ZSM3 486 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 BEND4Q6ZU67 534 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 OR2H1Q9GZK4 316 aa13.22□□□□□ -0.29
PTPN20-206ENST00000395722 A0A096LPE4 126 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 A0A1W2PPZ6 126 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 H2BFMP0C1H6 154 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 CELP19835 753 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 OTX1P32242 354 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 NANOS3P60323 173 aaKnown RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 TBRG1Q3YBR2 411 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 SLC36A2Q495M3 483 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 NCCRP1Q6ZVX7 275 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 CLVS1Q8IUQ0 354 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 HDHD2Q9H0R4 259 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 JKAMPQ9P055 326 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 OSGIN2Q9Y236 505 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 ZNF503-AS2A6NEH8 195 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 SGCEO43556 437 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 SYNGR3O43761 229 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 GABARAPO95166 117 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 TMBIM6P55061 237 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 PSG4Q00888 419 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 RSPO1Q2MKA7 263 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 KRTAP27-1Q3LI81 207 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 HIKESHIQ53FT3 197 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 OR2G2Q8NGZ5 317 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-206ENST00000395722 SMIM19Q96E16 107 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 PGLYRP3Q96LB9 341 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 DOK1Q99704 481 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 ATPIF1Q9UII2 106 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 FBXL3Q9UKT7 428 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 R4GMQ9 66 aa13.21□□□□□ -0.29
PTPN20-206ENST00000395722 A8MXE2 369 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 RPP14O95059 124 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PNPP00491 289 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 PATE4P0C8F1 98 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 CRYGSP22914 178 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 GABRA5P31644 462 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 CCR9P51686 369 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 GRB2P62993 217 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 ECH1Q13011 328 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 MRGPRGQ86SM5 289 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 RND1Q92730 232 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 DGCR14Q96DF8 476 aaKnown RBP13.2□□□□□ -0.3
PTPN20-206ENST00000395722 C4orf45Q96LM5 186 aa13.2□□□□□ -0.3
PTPN20-206ENST00000395722 COQ7Q99807 217 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms