RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 KRR1Q13601 381 aaKnown RBP16.21■□□□□ 0.19
COL11A2-204ENST00000395194 ANKDD1AQ495B1 522 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 ZBED5Q49AG3 693 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 RBMS3Q6XE24 437 aaKnown RBP16.21■□□□□ 0.19
COL11A2-204ENST00000395194 FKBP9P1Q75LS8 142 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.21■□□□□ 0.19
COL11A2-204ENST00000395194 SLC15A3Q8IY34 581 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 BCL6BQ8N143 479 aaPredicted RBP16.21■□□□□ 0.19
COL11A2-204ENST00000395194 ZNF283Q8N7M2 679 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 SAMD8Q96LT4 415 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 OR2V2Q96R30 315 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 SIGLEC11Q96RL6 698 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 SYT4Q9H2B2 425 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 MRGBPQ9NV56 204 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 ASH2LQ9UBL3 628 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 IL20RAQ9UHF4 553 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 PPP1R3CQ9UQK1 317 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 AUP1Q9Y679 476 aa16.21■□□□□ 0.19
COL11A2-204ENST00000395194 IGHV3OR16-10A0A075B7F0 116 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 IGHV3-64DA0A0J9YX35 117 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 SERPINA1P01009 418 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 DBHP09172 617 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 KITLGP21583 273 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 ZNF154Q13106 437 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 HLXQ14774 488 aaPredicted RBP16.2■□□□□ 0.18
COL11A2-204ENST00000395194 KLF17Q5JT82 389 aaPredicted RBP16.2■□□□□ 0.18
COL11A2-204ENST00000395194 RRM2BQ7LG56 351 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 FAM122BQ7Z309 247 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 OR10AD1Q8NGE0 317 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 SGMS2Q8NHU3 365 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 POP5Q969H6 163 aaKnown RBP16.2■□□□□ 0.18
COL11A2-204ENST00000395194 NTN4Q9HB63 628 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 ARGLU1Q9NWB6 273 aaPredicted RBP16.2■□□□□ 0.18
COL11A2-204ENST00000395194 PTTG3PQ9NZH4 202 aa16.2■□□□□ 0.18
COL11A2-204ENST00000395194 COA3Q9Y2R0 106 aaPredicted RBP16.2■□□□□ 0.18
COL11A2-204ENST00000395194 PPIAL4EA0A075B759 164 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 PPIAL4CA0A0B4J2A2 164 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 DNAJC9-AS1A6NH13 148 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 PPIAL4DF5H284 164 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 NME4O00746 187 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 SOCS2O14508 198 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 SLC16A7O60669 478 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 GPANK1O95872 356 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 PPIAL4FP0DN26 164 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 H2AFXP16104 143 aaPredicted RBP16.19■□□□□ 0.18
COL11A2-204ENST00000395194 NCK1P16333 377 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 ZNF12P17014 697 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 SLC7A2P52569 658 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 GUCY1A3Q02108 690 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 AQP6Q13520 282 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 TMEM155Q4W5P6 130 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 CBLL1Q75N03 491 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 LRRC28Q86X40 367 aaPredicted RBP16.19■□□□□ 0.18
COL11A2-204ENST00000395194 RNF113BQ8IZP6 322 aaKnown RBP16.19■□□□□ 0.18
COL11A2-204ENST00000395194 ATG16L2Q8NAA4 619 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 ZNF420Q8TAQ5 688 aaPredicted RBP16.19■□□□□ 0.18
COL11A2-204ENST00000395194 IL19Q9UHD0 177 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 NUP50Q9UKX7 468 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 POLR1DQ9Y2S0 133 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 INSIG2Q9Y5U4 225 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 MEGF8Q7Z7M0 2845 aa16.19■□□□□ 0.18
COL11A2-204ENST00000395194 CEACAM18A8MTB9 384 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 RER1O15258 196 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 SLC6A9P48067 706 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 CENPAP49450 140 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 MMP16P51512 607 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 PRSS12P56730 875 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 DBPQ10586 325 aaPredicted RBP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 CCDC92Q53HC0 331 aaPredicted RBP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 ESCO2Q56NI9 601 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 FGD3Q5JSP0 725 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 OR2T2Q6IF00 324 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 TMPRSS11FQ6ZWK6 438 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 ARPINQ7Z6K5 226 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 JAZF1Q86VZ6 243 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 OR1F12Q8NHA8 337 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 SLC7A13Q8TCU3 470 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 TAF15Q92804 592 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 FAM162AQ96A26 154 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 HAVCR1Q96D42 359 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 ZNF48Q96MX3 618 aaPredicted RBP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 MRI1Q9BV20 369 aa16.18■□□□□ 0.18
COL11A2-204ENST00000395194 NMNAT1Q9HAN9 279 aaPredicted RBP16.18■□□□□ 0.18
COL11A2-204ENST00000395194 OR6C6A6NF89 314 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 F5H0A9 414 aaPredicted RBP16.17■□□□□ 0.18
COL11A2-204ENST00000395194 TMEM178BH3BS89 294 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 SURF4O15260 269 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 KHDRBS3O75525 346 aaKnown RBP16.17■□□□□ 0.18
COL11A2-204ENST00000395194 NDUFB2O95178 105 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 HKR1P10072 659 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 SDHAP31040 664 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 MDH2P40926 338 aaKnown RBP16.17■□□□□ 0.18
COL11A2-204ENST00000395194 GSK3BP49841 420 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 MEP1BQ16820 701 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 PTCHD4Q6ZW05 846 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 TSEN54Q7Z6J9 526 aaKnown RBP16.17■□□□□ 0.18
COL11A2-204ENST00000395194 CYP4Z1Q86W10 505 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 GLB1L2Q8IW92 636 aa16.17■□□□□ 0.18
COL11A2-204ENST00000395194 FAM156AQ8NDB6 213 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms