RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 GABRA1P14867 456 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 S100GP29377 79 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 BTCP35070 178 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 BIDP55957 195 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 SRSF5Q13243 272 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 ZNF169Q14929 603 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 CT45A2Q5DJT8 189 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 B3GNTL1Q67FW5 361 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 H1FNTQ75WM6 255 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 OR1J2Q8NGS2 313 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 OR10AC1Q8NH08 325 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 KCNG3Q8TAE7 436 aa10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 EXOSC3Q9NQT5 275 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 MRPS28Q9Y2Q9 187 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-209ENST00000394804 A0A0B4J2A0 478 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SLC22A23A1A5C7 686 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 CFDP00746 253 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 IL9P15248 144 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SFTPDP35247 375 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 GFERP55789 205 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SMUG1Q53HV7 270 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 MESTQ5EB52 335 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 FAM74A1Q5RGS3 127 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 OR5T2Q8NGG2 359 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 NKX3-1Q99801 234 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SHPKQ9UHJ6 478 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 LRP12Q9Y561 859 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 M0R036 132 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 B3GALNT1O75752 331 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 CHRM2P08172 466 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 TMIGD3P0DMS9 266 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 RPL35P42766 123 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 GLP1RP43220 463 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 GPR3P46089 330 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 CLDN6P56747 220 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 ZNF117Q03924 483 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SMAD2Q15796 467 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 NKAIN2Q5VXU1 208 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 OR56B1Q8NGI3 324 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 FGF11Q92914 225 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 CTHRC1Q96CG8 243 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 PCDHGA5Q9Y5G8 931 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 NPIPA2E9PIF3 369 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 NPIPA3F8WFD2 350 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 LINC01565O15544 149 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 SNAPINO95295 136 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 APOC1P02654 83 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 GABRG2P18507 467 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 ANGPTL5Q86XS5 388 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 PPP1R1CQ8WVI7 109 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 OIT3Q8WWZ8 545 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 EDAQ92838 391 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 CXorf58Q96LI9 332 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 LINC00052Q96N35 136 aa10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 TCF20Q9UGU0 1960 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-209ENST00000394804 PLXNB3Q9ULL4 1909 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 MPC2O95563 127 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 PMP2P02689 132 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 CELA2BP08218 269 aaPredicted RBP10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 RAB2AP61019 212 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 FUT7Q11130 342 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 C17orf107Q6ZR85 190 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 LYG2Q86SG7 212 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 RNF141Q8WVD5 230 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 SCARF2Q96GP6 870 aaPredicted RBP10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 ZC3H10Q96K80 434 aaKnown RBP10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 GAREM1Q9H706 876 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 C12orf10Q9HB07 376 aa10.52□□□□□ -0.72
UBE2D3-209ENST00000394804 CXCL2P19875 107 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 UBE2IP63279 158 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 CORO6Q6QEF8 472 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 OR1M1Q8NGA1 313 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 MVB12AQ96EY5 273 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 GPX7Q96SL4 187 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 WDR77Q9BQA1 342 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 ZNF649Q9BS31 505 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 C1QTNF6Q9BXI9 259 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 ZNF160Q9HCG1 818 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 EHFQ9NZC4 300 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 KLHDC2Q9Y2U9 406 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 UNC80Q8N2C7 3258 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 EPOPA6NHQ4 379 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 MTRF1O75570 445 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 OPN1LWP04000 364 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 HOXB5P09067 269 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 ZNF84P51523 738 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 PNLIPRP2P54317 469 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 HERV-K104P61576 105 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 VWA2Q5GFL6 755 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 SGPP2Q8IWX5 399 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 TMEM156Q8N614 296 aa10.52□□□□□ -0.73
UBE2D3-209ENST00000394804 BCL2L14Q9BZR8 327 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms