RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEFF2Q9UIK5 374 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 MAP1AP78559 2803 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 TMEM129A0AVI4 362 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 H7C417 338 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 SYNGR3O43761 229 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 GGT2P36268 569 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 WNT5AP41221 380 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 PPP2R2BQ00005 443 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 ELFN2Q5R3F8 820 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 PLBD1Q6P4A8 553 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 CPOQ8IVL8 374 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 OR1J1Q8NGS3 322 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 PITX2Q99697 317 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 DOK1Q99704 481 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 CIB1Q99828 191 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 HCAR1Q9BXC0 346 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 MRPL37Q9BZE1 423 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 HDHD2Q9H0R4 259 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 ATPIF1Q9UII2 106 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 DUSP13Q9UII6 198 aa16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 GDF2Q9UK05 429 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-204ENST00000393546 ARFGEF3Q5TH69 2177 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 OR6C6A6NF89 314 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 GLCEO94923 617 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 ENTPD1P49961 510 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 MSMPQ1L6U9 139 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 TMEM154Q6P9G4 183 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 TGIF2LYQ8IUE0 185 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 SYNPRQ8TBG9 265 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 DCLRE1CQ96SD1 692 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 COQ7Q99807 217 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 VRK1Q99986 396 aaPredicted RBP16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 SYT3Q9BQG1 590 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 WDR76Q9H967 626 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 FZR1Q9UM11 496 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 GRIP1Q9Y3R0 1128 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 ORC6Q9Y5N6 252 aa16.34■□□□□ 0.21
PDLIM7-204ENST00000393546 ITPR3Q14573 2671 aa16.33■□□□□ 0.21
PDLIM7-204ENST00000393546 ZAR1LA6NP61 321 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ZNF593O00488 134 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ICMTO60725 284 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 NDUFS7O75251 213 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 BAG2O95816 211 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ABHD16AO95870 558 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ZNF250P15622 560 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 GSTT1P30711 240 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 PPOXP50336 477 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ECH1Q13011 328 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ZNF718Q3SXZ3 478 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 KLHL12Q53G59 568 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 TEX30Q5JUR7 227 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 LINC01590Q5TEZ4 76 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 SLX4IPQ5VYV7 408 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 LYPD4Q6UWN0 246 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 CXXC5Q7LFL8 322 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 LRP11Q86VZ4 500 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ZNF101Q8IZC7 436 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 PQLC1Q8N2U9 271 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 WFDC11Q8NEX6 87 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 ABHD4Q8TB40 342 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 DYNLRB1Q9NP97 96 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 HINT3Q9NQE9 182 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 TBCCD1Q9NVR7 557 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 COMMD3-BMI1R4GMX3 469 aa16.33■□□□□ 0.2
PDLIM7-204ENST00000393546 PRODHO43272 600 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 IGHV4-39P01824 125 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 SPARCP09486 303 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 EPHA2P29317 976 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 GCH1P30793 250 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 ERVS71-1P61550 626 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 PPP1CBP62140 327 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 MOGQ16653 247 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 SLC35D3Q5M8T2 416 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 CFAP77Q6ZQR2 320 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 KRTAP1-3Q8IUG1 177 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 IPCEF1Q8WWN9 437 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 SLC7A6Q92536 515 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 INTS14Q96SY0 518 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 C9orf16Q9BUW7 83 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 RAB1BQ9H0U4 201 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 RIBC2Q9H4K1 309 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 USE1Q9NZ43 259 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 GPR160Q9UJ42 338 aa16.32■□□□□ 0.2
PDLIM7-204ENST00000393546 ANKRD65E5RJM6 399 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 NGFP01138 241 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 ALPLP05186 524 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 ERCC1P07992 297 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 DBHP09172 617 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 TUBG1P23258 451 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 RPS27P42677 84 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 RGS6P49758 472 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 ALDH3A2P51648 485 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 EFNA4P52798 201 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 NUDT6P53370 316 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 RAD23AP54725 363 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 KLF3P57682 345 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 RPS7P62081 194 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 PCK2Q16822 640 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 C12orf73Q69YU5 71 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms