RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 SELENOFO60613 162 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 CD40P25942 277 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 EVX1P49640 407 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 OR2AJ1Q8NGZ0 328 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 CNIH3Q8TBE1 160 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
USP44-202ENST00000393091 SP140LQ9H930 580 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 TMEM129A0AVI4 362 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 ZNF670-ZNF695F2Z2N8 137 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 GPANK1O95872 356 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 LYNP07948 512 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 NAAAQ02083 359 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 TLE4Q04727 773 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 KCTD21Q4G0X4 260 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 TMEM108Q6UXF1 575 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 ZNF679Q8IYX0 411 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 SPSB4Q96A44 273 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 MRPL48Q96GC5 212 aaKnown RBP11.5□□□□□ -0.57
USP44-202ENST00000393091 SEC61A2Q9H9S3 476 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 ISYNA1Q9NPH2 558 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 TBCCD1Q9NVR7 557 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 ASH2LQ9UBL3 628 aa11.5□□□□□ -0.57
USP44-202ENST00000393091 FBXO9Q9UK97 447 aaPredicted RBP11.5□□□□□ -0.57
USP44-202ENST00000393091 IGHV2OR16-5A0A0B4J2B6 119 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 IQCMA0A1B0GVH7 501 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 DPRXA6NFQ7 191 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 A6NNC1 897 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 CLIC3O95833 236 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 CECR9P0C854 216 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ACTA2P62736 377 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ACTG2P63267 376 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 BDH1Q02338 343 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 MEP1BQ16820 701 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 KCTD18Q6PI47 426 aaPredicted RBP11.49□□□□□ -0.57
USP44-202ENST00000393091 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 SLAMF6Q96DU3 332 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 MOB1AQ9H8S9 216 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ZNF391Q9UJN7 358 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 COPS3Q9UNS2 423 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 CAB39Q9Y376 341 aaPredicted RBP11.49□□□□□ -0.57
USP44-202ENST00000393091 LOC100509620A0A075B734 347 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 A0A096LPE4 126 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 A0A1W2PPZ6 126 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 HLA-HP01893 362 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 CDK1P06493 297 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ACSM4P0C7M7 580 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 STOMP27105 288 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
USP44-202ENST00000393091 ALDH16A1Q8IZ83 802 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 OR6K6Q8NGW6 343 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 TMEM80Q96HE8 168 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ATF6BQ99941 703 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 RASSF1Q9NS23 344 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 LRCH1Q9Y2L9 728 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 TPRKBQ9Y3C4 175 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 SHISA9B4DS77 424 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 FADS2O95864 444 aaKnown RBP11.49□□□□□ -0.57
USP44-202ENST00000393091 PAX1P15863 534 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 TGM4P49221 684 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 MMP16P51512 607 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
USP44-202ENST00000393091 TBC1D28Q2M2D7 210 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 LYPD4Q6UWN0 246 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 DCXRQ7Z4W1 244 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ACBD7Q8N6N7 88 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 OPA3Q9H6K4 179 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 ERVK13-1Q9NX77 482 aa11.49□□□□□ -0.57
USP44-202ENST00000393091 PLP2Q04941 152 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 SP5Q6BEB4 398 aaPredicted RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 MEX3BQ6ZN04 569 aaKnown RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 DPY19L4Q7Z388 723 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 SLC30A7Q8NEW0 376 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 LILRB1Q8NHL6 650 aaPredicted RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 PRSS44E7EML9 344 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 DOK2O60496 412 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 FAM20BO75063 409 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 PRSS48Q7RTY5 328 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 MYDGFQ969H8 173 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 NR1H4Q96RI1 486 aaPredicted RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 MED18Q9BUE0 208 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 CDADC1Q9BWV3 514 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 LSM2Q9Y333 95 aaKnown RBP11.48□□□□□ -0.57
USP44-202ENST00000393091 PCDHGB5Q9Y5G0 923 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 SPTA1P02549 2419 aa11.48□□□□□ -0.57
USP44-202ENST00000393091 A0A1W2PQL4 384 aaPredicted RBP11.47□□□□□ -0.57
USP44-202ENST00000393091 PRR32B1ATL7 298 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 PYCARD-AS1I3L0S3 204 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 RER1O15258 196 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms