RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SOX14O95416 240 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 UMODP07911 640 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 BDKRB2P30411 391 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 GAMTQ14353 236 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 DECR1Q16698 335 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 CDCP2Q5VXM1 449 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 PAPD4Q6PIY7 484 aaKnown RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 PRICKLE2Q7Z3G6 844 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 TMEM255BQ8WV15 326 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 METTL21AQ8WXB1 218 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 PNPLA2Q96AD5 504 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 CCNL2Q96S94 520 aaPredicted RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 ATG101Q9BSB4 218 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 IFT27Q9BW83 186 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 PRO1933Q9H354 126 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 NKIRAS2Q9NYR9 191 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 PTPRZ1P23471 2315 aaPredicted RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 FRG2CA6NGY1 282 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 MKRN2OSH3BPM6 223 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 MT-ND4LP03901 98 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 MT-ND4P03905 459 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 EIF4EP06730 217 aaKnown RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 SHC1P29353 583 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 ACAA2P42765 397 aaKnown RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 TPBGQ13641 420 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 OR1Q1Q15612 314 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 CD226Q15762 336 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 B3GLCTQ6Y288 498 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 TIPARPQ7Z3E1 657 aaKnown RBP17.07■□□□□ 0.32
CCDC50-202ENST00000392456 FJX1Q86VR8 437 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 MARCH9Q86YJ5 346 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 OR51B6Q9H340 312 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 GLRX2Q9NS18 164 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 NCDNQ9UBB6 729 aa17.07■□□□□ 0.32
CCDC50-202ENST00000392456 STK17BO94768 372 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 IL33O95760 270 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 HOXB5P09067 269 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 GAAP10253 952 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 HOXA5P20719 270 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 SMIM11AP58511 58 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 SNRPGP62308 76 aaKnown RBP17.06■□□□□ 0.32
CCDC50-202ENST00000392456 DCAF12Q5T6F0 453 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 TMEM205Q6UW68 189 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 CPEB2Q7Z5Q1 589 aaKnown RBP17.06■□□□□ 0.32
CCDC50-202ENST00000392456 OAFQ86UD1 273 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 PRSS27Q9BQR3 290 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 TRDV1A0A1B0GX56 115 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 ARRDC5A6NEK1 342 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 OR6C76A6NM76 312 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 FADS1O60427 444 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 REM1O75628 298 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 LYPD3O95274 346 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 GUSBP08236 651 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 CD3GP09693 182 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 IFNGR1P15260 489 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 MGMTP16455 207 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 GABRA5P31644 462 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 ST3GAL3Q11203 375 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 PLA2G7Q13093 441 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 LIN54Q6MZP7 749 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 OR11G2Q8NGC1 345 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 RAB24Q969Q5 203 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 BCO1Q9HAY6 547 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 CEP250Q9BV73 2442 aa17.06■□□□□ 0.32
CCDC50-202ENST00000392456 TRAPPC13A5PLN9 417 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 SERINC4A6NH21 518 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 PIP5K1CO60331 668 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 UTS2O95399 124 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 MT-CO3P00414 261 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 ANXA2P07355 339 aaKnown RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 LINC00614P0C842 121 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 RPA2P15927 270 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF25P17030 456 aaPredicted RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 ACHEP22303 614 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 TRIP6Q15654 476 aaKnown RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 TMEM201Q5SNT2 666 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 HLA-DQA1Q5Y7H0 255 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 TPRA1Q86W33 373 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 C3orf49Q96BT1 292 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF524Q96C55 264 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 CLCC1Q96S66 551 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 CDC6Q99741 560 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 PARPBPQ9NWS1 579 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 DNAJC27Q9NZQ0 273 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 CNIH4Q9P003 139 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 OPN4Q9UHM6 478 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 PTRH2Q9Y3E5 179 aaKnown RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 A0A1B0GVC2 190 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 A6NIN4 97 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 C9orf172C9J069 976 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 MASP2O00187 686 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 PTBP3O95758 552 aaKnown RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 TBXA2RP21731 343 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 CBLN3Q6UW01 205 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 OR2W3Q7Z3T1 314 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 RANBP3LQ86VV4 465 aaPredicted RBP17.05■□□□□ 0.32
CCDC50-202ENST00000392456 GRHL3Q8TE85 626 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 NANSQ9NR45 359 aa17.05■□□□□ 0.32
CCDC50-202ENST00000392456 H7C1Q1 480 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms