RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PCDH15Q96QU1 1955 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 H3BMH7 237 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GPANK1O95872 356 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ADRB1P08588 477 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 CDK2P24941 298 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 EPHA8P29322 1005 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 SSTR2P30874 369 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 CCKBRP32239 447 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 CSF2RBP32927 897 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 TAS2R60P59551 318 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ADAM8P78325 824 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 SLC17A1Q14916 467 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 SLC35D2Q76EJ3 337 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 STT3BQ8TCJ2 826 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C14orf144Q96I85 54 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C4orf45Q96LM5 186 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FOXN4Q96NZ1 517 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 OR8B4Q96RC9 309 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 OR6C1Q96RD1 312 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GFI1Q99684 422 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C20orf85Q9H1P6 137 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 DNAJB11Q9UBS4 358 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 STEAP1Q9UHE8 339 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FOXJ3Q9UPW0 622 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 A6NIZ1 184 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 SIGLEC6O43699 453 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 WDPCPO95876 746 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 RAP1BP61224 184 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 RAP1AP62834 184 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 CFHR1Q03591 330 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FGL1Q08830 312 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 CLINT1Q14677 625 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GSG1Q2KHT4 349 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 COL28A1Q2UY09 1125 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 WDR74Q6RFH5 385 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 TGIF2LXQ8IUE1 241 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF679Q8IYX0 411 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 DNAAF1Q8NEP3 725 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 THAP3Q8WTV1 239 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF524Q96C55 264 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF501Q96CX3 271 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 NXPE2Q96DL1 559 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF587Q96SQ5 575 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ING1Q9UK53 422 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 IGHV3-20A0A0C4DH32 117 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF729A6NN14 1252 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 NPIPA5E9PKD4 350 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FADS1O60427 444 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FBP1P09467 338 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ANKRD34CP0C6C1 535 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 S100PP25815 95 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 SCAND1P57086 179 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 FOXK1P85037 733 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GLO1Q04760 184 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C17orf67Q0P5P2 114 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 EIF2B1Q14232 305 aaKnown RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 TMEM71Q6P5X7 295 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C5orf34Q96MH7 638 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 ULBP3Q9BZM4 244 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 OR11A1Q9GZK7 315 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 OR10A4Q9H209 315 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GPN1Q9HCN4 374 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-204ENST00000392003 GHRLQ9UBU3 117 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 NPIPA1Q9UND3 350 aa8.67□□□□□ -1.02
COL6A3-204ENST00000392003 C17orf51A8MQB3 221 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 H7C2Y5 167 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
COL6A3-204ENST00000392003 APOC3P02656 99 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 TAS2R20P59543 309 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 FAM189A2Q15884 450 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 WDR38Q5JTN6 314 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 C3orf33Q6P1S2 294 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 TMEM88Q6PEY1 159 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 RABEPKQ7Z6M1 372 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 LRRTM1Q86UE6 522 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF454Q8N9F8 522 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 OR2I1PQ8NGU4 316 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 GCDHQ92947 438 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-204ENST00000392003 NAT6Q93015 286 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 DHDHQ9UQ10 334 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 PI4KAP42356 2102 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 TRBV5-7A0A0A0MS05 114 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 PLPP3O14495 311 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 SCRG1O75711 98 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 CD46P15529 392 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 ADRA2CP18825 462 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 CCL7P80098 99 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 MELKQ14680 651 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 RAB11BQ15907 218 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 FAM76BQ5HYJ3 339 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 ELFN2Q5R3F8 820 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 OR5M10Q6IEU7 315 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 OR11H7Q8NGC8 314 aa8.66□□□□□ -1.02
COL6A3-204ENST00000392003 OR10J5Q8NHC4 309 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms