RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 WNT1P04628 370 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 ADIPOR1Q96A54 375 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 MEGF10Q96KG7 1140 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 ACTR3CQ9C0K3 210 aaPredicted RBP14.78□□□□□ -0.04
SHANK1-204ENST00000391814 CHRNB4P30926 498 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 STAC2Q6ZMT1 411 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 KCNJ15Q99712 375 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 RPS15P62841 145 aaKnown RBP14.78□□□□□ -0.04
SHANK1-204ENST00000391814 GUK1Q16774 197 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 PKDCCQ504Y2 493 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 FAHD1Q6P587 224 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 CMBLQ96DG6 245 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 MS4A8Q9BY19 250 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 SLC45A1Q9Y2W3 748 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 GDF1P27539 372 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 CMTM2Q8TAZ6 248 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 TPSD1Q9BZJ3 242 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 IKZF5Q9H5V7 419 aa14.78□□□□□ -0.04
SHANK1-204ENST00000391814 MBTPS2O43462 519 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 SLC25A6P12236 298 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 TMEM201Q5SNT2 666 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 H2BFWTQ7Z2G1 175 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 OR10J5Q8NHC4 309 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 NUDCD2Q8WVJ2 157 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 HEYLQ9NQ87 328 aaPredicted RBP14.77□□□□□ -0.04
SHANK1-204ENST00000391814 MEIKINA0A087WXM9 373 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 IFITM5A6NNB3 132 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A6P0DMU7 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A5P0DMU8 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A7P0DMV0 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A8P0DMV1 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A9P0DMV2 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A2Q5DJT8 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A1Q5HYN5 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 LRP11Q86VZ4 500 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CT45A3Q8NHU0 189 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 GINS3Q9BRX5 216 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 SLC2A9Q9NRM0 540 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 C5P01031 1676 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 TCRBV16S1A1N1A0A5B0 115 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 PRSS38A1L453 326 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 CTSLP07711 333 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 GABRA4P48169 554 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 TOMM34Q15785 309 aaPredicted RBP14.77□□□□□ -0.04
SHANK1-204ENST00000391814 GABRQQ9UN88 632 aa14.77□□□□□ -0.04
SHANK1-204ENST00000391814 ASCL1P50553 236 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 ASTLQ6HA08 431 aaPredicted RBP14.77□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF66Q6ZN08 573 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 MOB1AQ9H8S9 216 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 PLEKHA2Q9HB19 425 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 GPNMBQ14956 572 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 CLLU1OSQ5K130 101 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 LIPNQ5VXI9 398 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 LOC107986453A0A1B0GWG9 222 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 SLC17A1Q14916 467 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 TMEM183BQ1AE95 376 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 NHLRC1Q6VVB1 395 aa14.77□□□□□ -0.05
SHANK1-204ENST00000391814 RBM38Q9H0Z9 239 aaKnown RBP14.77□□□□□ -0.05
SHANK1-204ENST00000391814 GALNT16Q8N428 558 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 Q96M85 177 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 RGPD8O14715 1765 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-204ENST00000391814 BLACEA4D250 179 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MFAP5Q13361 173 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 CCSMST1Q4G0I0 132 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF385BQ569K4 471 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MED25Q71SY5 747 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF740Q8NDX6 193 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 TMEM37Q8WXS4 190 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 TGFBR3Q03167 851 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ASB13Q8WXK3 278 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ISG20Q96AZ6 181 aaKnown RBP14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MAGT1Q9H0U3 335 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MMP24Q9Y5R2 645 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 USP3Q9Y6I4 520 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 LRP6O75581 1613 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MYADML2A6NDP7 307 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 XRCC2O43543 280 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 OLFM2O95897 454 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF25P17030 456 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-204ENST00000391814 CSNK1DP48730 415 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MAMSTRQ6ZN01 415 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 SLC16A12Q6ZSM3 486 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 PPP1R3BQ86XI6 285 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 SPNS2Q8IVW8 549 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 OR8B4Q96RC9 309 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 MS4A7Q9GZW8 240 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-204ENST00000391814 CST2P09228 141 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 TMEM176BQ3YBM2 270 aaPredicted RBP14.76□□□□□ -0.05
SHANK1-204ENST00000391814 SLC39A7Q92504 469 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ST6GAL2Q96JF0 529 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 ENTPD2Q9Y5L3 495 aa14.76□□□□□ -0.05
SHANK1-204ENST00000391814 PLSCR5A0PG75 271 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 ZNF891A8MT65 544 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-204ENST00000391814 GPR31O00270 319 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 CA12O43570 354 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 POU3F3P20264 500 aaPredicted RBP14.75□□□□□ -0.05
SHANK1-204ENST00000391814 PPP1CBP62140 327 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 HIST1H3AP68431 136 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 MZT1Q08AG7 82 aa14.75□□□□□ -0.05
SHANK1-204ENST00000391814 FAM27D1Q5T7N8 215 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms