RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 A0A0U1RQK1 487 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 NUDT19A8MXV4 375 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 KCNAB3O43448 404 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 FCGR2CP31995 323 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 CPEB2Q7Z5Q1 589 aaKnown RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 OR4N2Q8NGD1 307 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 DAZLQ92904 295 aaKnown RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 KLHDC7BQ96G42 594 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 BRWD3Q6RI45 1802 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 BHLHE40O14503 412 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 GSTZ1O43708 216 aaPredicted RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 CLCC1Q96S66 551 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 NIPSNAP3BQ9BS92 247 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 SLCO1C1Q9NYB5 712 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 NFYBP25208 207 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 RFC3P40938 356 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 SLC6A8P48029 635 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 EOGTQ5NDL2 527 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 NCMAPQ5T1S8 102 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 TMEM217Q8N7C4 229 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 OR1E3Q8WZA6 343 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 UBL7Q96S82 380 aaPredicted RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 OR52A1Q9UKL2 312 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 LOC107986453A0A1B0GWG9 222 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 TCRBV21S2A2A0A5A6 115 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 BRINP1O60477 761 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 SERTAD2Q14140 314 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 ZNF660Q6AZW8 331 aaPredicted RBP12.94□□□□□ -0.34
RTF1-201ENST00000389629 GLIPR1L1Q6UWM5 242 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 FAM219AQ8IW50 185 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 ARIH2OSQ8N7S6 290 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 TERB2Q8NHR7 220 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 CCL4L1Q8NHW4 92 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 UQCC1Q9NVA1 299 aa12.94□□□□□ -0.34
RTF1-201ENST00000389629 SCN3AQ9NY46 2000 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 RLFQ13129 1914 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 MED19A0JLT2 244 aaPredicted RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 H0Y8X5 98 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 DIRAS3O95661 229 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 NHLRC3Q5JS37 347 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 PUSL1Q8N0Z8 303 aaKnown RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 THAP10Q9P2Z0 257 aaPredicted RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 SBF1O95248 1867 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 SCGB1D1O95968 90 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 IFNA1P01562 189 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 HAGHQ16775 308 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 ATRAIDQ6UW56 229 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 DCXRQ7Z4W1 244 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 ZNF251Q9BRH9 671 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 SEC16AO15027 2179 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 CTAG2O75638 210 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 RPL12P30050 165 aaKnown RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 PPIAP62937 165 aaKnown RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 LHX8Q68G74 356 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 LYRM4Q9HD34 91 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 RP1P56715 2156 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 PHOX2AO14813 284 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 CX3CR1P49238 355 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 F2RL1P55085 397 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 CORO6Q6QEF8 472 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 CMBLQ96DG6 245 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 KIRREL1Q96J84 757 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 MED9Q9NWA0 146 aa12.93□□□□□ -0.34
RTF1-201ENST00000389629 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 COA3Q9Y2R0 106 aaPredicted RBP12.93□□□□□ -0.34
RTF1-201ENST00000389629 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 VSTM2BA6NLU5 285 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 GPANK1O95872 356 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 TIMP1P01033 207 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 TAS2R46P59540 309 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 OR2L13Q8N349 312 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 HSD17B8Q92506 261 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 ATOH1Q92858 354 aaPredicted RBP12.92□□□□□ -0.34
RTF1-201ENST00000389629 NMNAT2Q9BZQ4 307 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 PRO1933Q9H354 126 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 SFXN1Q9H9B4 322 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 A0A0B4J2E0 115 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 A0A1B0GX12 115 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 PLSCR5A0PG75 271 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 CNOT4O95628 575 aaKnown RBP12.92□□□□□ -0.34
RTF1-201ENST00000389629 CD37P11049 281 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 ELAVL1Q15717 326 aaKnown RBP12.92□□□□□ -0.34
RTF1-201ENST00000389629 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 ZNF709Q8N972 641 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 PLPP5Q8NEB5 264 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 OR56B1Q8NGI3 324 aa12.92□□□□□ -0.34
RTF1-201ENST00000389629 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms