RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 FAM122BQ7Z309 247 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 CPEB2Q7Z5Q1 589 aaKnown RBP17.09■□□□□ 0.33
CSPG5-202ENST00000383738 OR13C3Q8NGS6 347 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 OR14K1Q8NGZ2 314 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 TOMM40LQ969M1 308 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 SULT4A1Q9BR01 284 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 C12orf10Q9HB07 376 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 MED29Q9NX70 200 aa17.09■□□□□ 0.33
CSPG5-202ENST00000383738 IGHV3-15A0A0B4J1V0 119 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 GABARAPH6UMI1 98 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 CDC42EP2O14613 210 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 MPIG6BO95866 241 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 LCATP04180 440 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 CLDN17P56750 224 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 DCAF7P61962 342 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 GLO1Q04760 184 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 B3GNTL1Q67FW5 361 aaPredicted RBP17.08■□□□□ 0.33
CSPG5-202ENST00000383738 RPL22L1Q6P5R6 122 aaKnown RBP17.08■□□□□ 0.33
CSPG5-202ENST00000383738 ZNF417Q8TAU3 575 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 ZNF587Q96SQ5 575 aaPredicted RBP17.08■□□□□ 0.33
CSPG5-202ENST00000383738 SIRT3Q9NTG7 399 aaPredicted RBP17.08■□□□□ 0.33
CSPG5-202ENST00000383738 C20orf141Q9NUB4 165 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 PRELID3BQ9Y3B1 194 aa17.08■□□□□ 0.33
CSPG5-202ENST00000383738 LINC00862A6NCI5 91 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF98A6NK75 572 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 STK17BO94768 372 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 PLP2Q04941 152 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 SNTB1Q13884 538 aaKnown RBP17.08■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF674Q2M3X9 581 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 PNPLA2Q96AD5 504 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 ALG12Q9BV10 488 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 PLA2G3Q9NZ20 509 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 TMEM14AQ9Y6G1 99 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 SHISA3A0PJX4 238 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 OR5H14A6NHG9 310 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 HIST1H1CP16403 213 aaKnown RBP17.08■□□□□ 0.32
CSPG5-202ENST00000383738 HMGA2P52926 109 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 RPS27AP62979 156 aaKnown RBP17.08■□□□□ 0.32
CSPG5-202ENST00000383738 UBA52P62987 128 aaKnown RBP17.08■□□□□ 0.32
CSPG5-202ENST00000383738 LIPNQ5VXI9 398 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 COX15Q7KZN9 410 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 OR5T1Q8NG75 326 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF629Q9UEG4 869 aaPredicted RBP17.08■□□□□ 0.32
CSPG5-202ENST00000383738 MEMO1Q9Y316 297 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 FAM96BQ9Y3D0 163 aa17.08■□□□□ 0.32
CSPG5-202ENST00000383738 SLC25A45Q8N413 288 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 WDSUB1Q8N9V3 476 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 MCRIP1C9JLW8 97 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 MASP2O00187 686 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 CTRB1P17538 263 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 PPICP45877 212 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 DEFA6Q01524 100 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 MFSD13AQ14CX5 517 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 CTRB2Q6GPI1 263 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 SLC18B1Q6NT16 456 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 C6orf15Q6UXA7 325 aaPredicted RBP17.07■□□□□ 0.32
CSPG5-202ENST00000383738 TMEM91Q6ZNR0 172 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 OR5T2Q8NGG2 359 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 OR4C16Q8NGL9 310 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 GNRHR2Q96P88 292 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 NAA11Q9BSU3 229 aaPredicted RBP17.07■□□□□ 0.32
CSPG5-202ENST00000383738 POLE3Q9NRF9 147 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 PKDREJQ9NTG1 2253 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 H0YIG0 161 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 AVPR2P30518 371 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 CORO6Q6QEF8 472 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 TMEM200AQ86VY9 491 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 STPG2Q8N412 459 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 SMIM4Q8WVI0 70 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 UTP23Q9BRU9 249 aaKnown RBP17.07■□□□□ 0.32
CSPG5-202ENST00000383738 KCNK15Q9H427 330 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF346Q9UL40 294 aaKnown RBP17.07■□□□□ 0.32
CSPG5-202ENST00000383738 DOCK7Q96N67 2140 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 KCNJ3P48549 501 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 CRYBA2P53672 197 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 HNF4GQ14541 408 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 CALHM2Q9HA72 323 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 ELOVL3Q9HB03 270 aa17.07■□□□□ 0.32
CSPG5-202ENST00000383738 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 TMEM235A6NFC5 223 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 OR8U9P0C7N5 309 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 AMY2BP19961 511 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 CSF2RBP32927 897 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 PCBP4P57723 403 aaKnown RBP17.06■□□□□ 0.32
CSPG5-202ENST00000383738 ZNF565Q8N9K5 539 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 SORCS2Q96PQ0 1159 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 MFRPQ9BY79 579 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 IFITM5A6NNB3 132 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 RBMXL2O75526 392 aaKnown RBP17.06■□□□□ 0.32
CSPG5-202ENST00000383738 GAAP10253 952 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 ADH6P28332 368 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 CYB561P49447 251 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 GLYATL3Q5SZD4 288 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 VASH2Q86V25 355 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 CDH26Q8IXH8 852 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 IGHV3-64DA0A0J9YX35 117 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 TGM6O95932 706 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 RAB40ALP0C0E4 278 aa17.06■□□□□ 0.32
CSPG5-202ENST00000383738 RNF4P78317 190 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms