RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 J3KTA2 159 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 FXYD1O00168 92 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 EDF1O60869 148 aaKnown RBP19.4■□□□□ 0.7
U2AF1-202ENST00000380276 IGHV4-38-2P0DP08 117 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 TUBG1P23258 451 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 SLC9A3P48764 834 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 MMP16P51512 607 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 GNB2P62879 340 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 DEFA6Q01524 100 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 TRAM2Q15035 370 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 SLC9A3R2Q15599 337 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 VASH1Q7L8A9 365 aaPredicted RBP19.4■□□□□ 0.7
U2AF1-202ENST00000380276 OR10AD1Q8NGE0 317 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 LZICQ8WZA0 190 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 HAVCR1Q96D42 359 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 ZNF570Q96NI8 536 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 WACQ9BTA9 647 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 TMEM120AQ9BXJ8 343 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 TUBG2Q9NRH3 451 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 ADAM18Q9Y3Q7 739 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 SOX21Q9Y651 276 aaPredicted RBP19.4■□□□□ 0.7
U2AF1-202ENST00000380276 MEGF8Q7Z7M0 2845 aa19.4■□□□□ 0.7
U2AF1-202ENST00000380276 TRAV40A0A0B4J280 105 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 IGHV3-64DA0A0J9YX35 117 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 FAM220BPB1ANY3 271 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 CYB5R3P00387 301 aaPredicted RBP19.39■□□□□ 0.69
U2AF1-202ENST00000380276 FUT4P22083 530 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 CD80P33681 288 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 GPR4P46093 362 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 SF3A3Q12874 501 aaKnown RBP eCLIP19.39■□□□□ 0.69
U2AF1-202ENST00000380276 METTL21CQ5VZV1 264 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 LEG1Q6P5S2 330 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 ZNF730Q6ZMV8 503 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 SPATC1Q76KD6 591 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 OR2T12Q8NG77 320 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 PTP4A1Q93096 173 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 Q96M85 177 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 SIKE1Q9BRV8 207 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 POLR1DQ9Y2S0 133 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 MGAM2Q2M2H8 2515 aa19.39■□□□□ 0.69
U2AF1-202ENST00000380276 IFNW1P05000 195 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 OMGP23515 440 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 SELENOWP63302 87 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 PRKCDQ05655 676 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 AQP6Q13520 282 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 ANKDD1AQ495B1 522 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 OFCC1Q8IZS5 231 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 NDEL1Q9GZM8 345 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 GCM1Q9NP62 436 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 TNFRSF19Q9NS68 423 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 ASH2LQ9UBL3 628 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 IL20RAQ9UHF4 553 aa19.38■□□□□ 0.69
U2AF1-202ENST00000380276 MDFIC2A0A1B0GVS7 189 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 POM121CA8CG34 1229 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 BBIP1A8MTZ0 92 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 WNT2P09544 360 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 MDKP21741 143 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-202ENST00000380276 PAX8Q06710 450 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 HLXQ14774 488 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-202ENST00000380276 MAPRE2Q15555 327 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 TUSC1Q2TAM9 212 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 MESTQ5EB52 335 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 OR2T2Q6IF00 324 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 SLC27A4Q6P1M0 643 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 LRRN1Q6UXK5 716 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 RRM2BQ7LG56 351 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 VTCN1Q7Z7D3 282 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-202ENST00000380276 KLBQ86Z14 1044 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 ZDHHC16Q969W1 377 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 PLEKHA8Q96JA3 519 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 MEGF10Q96KG7 1140 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 GID8Q9NWU2 228 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 SNX13Q9Y5W8 968 aa19.37■□□□□ 0.69
U2AF1-202ENST00000380276 TEX13CA0A0J9YWL9 993 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 LOC100653049A0A140TA62 436 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 ELOVL7A1L3X0 281 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 HMGB1P1B2RPK0 211 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-202ENST00000380276 IFNL4K9M1U5 179 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 SLC16A7O60669 478 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 KRT34O76011 436 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 ZNF682O95780 498 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 CD14P08571 375 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 RAC2P15153 192 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 CTLA4P16410 223 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 CENPAP49450 140 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 SRP9P49458 86 aaKnown RBP19.36■□□□□ 0.69
U2AF1-202ENST00000380276 KLF10Q13118 480 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 FHL1Q13642 323 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 PDLIM3Q53GG5 364 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-202ENST00000380276 PCYOX1LQ8NBM8 494 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 BHLHE23Q8NDY6 225 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 OR1F12Q8NHA8 337 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 ACOT11Q8WXI4 607 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-202ENST00000380276 RASD2Q96D21 266 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 NEIL1Q96FI4 390 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-202ENST00000380276 MIOXQ9UGB7 285 aa19.36■□□□□ 0.69
U2AF1-202ENST00000380276 IGHV2-70DA0A0C4DH43 119 aa19.35■□□□□ 0.69
U2AF1-202ENST00000380276 PRSS37A4D1T9 235 aa19.35■□□□□ 0.69
U2AF1-202ENST00000380276 H0YL77 283 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms