RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ATP6V0BQ99437 205 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 SPXQ9BT56 116 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 MYOTQ9UBF9 498 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 MGAT4AQ9UM21 535 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 TRDV1A0A1B0GX56 115 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 SAGE2PA6NJ88 616 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 TOX3O15405 576 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 ELK1P19419 428 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 SDHAP31040 664 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 ADAM8P78325 824 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 TLE3Q04726 772 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF676Q8N7Q3 588 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 METTL9Q9H1A3 318 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 BEX1Q9HBH7 125 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 NOX4Q9NPH5 578 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 MRPS18AQ9NVS2 196 aaKnown RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 TAS2R5Q9NYW4 299 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 KLHL13Q9P2N7 655 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 V9GYH0 126 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF593O00488 134 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 LIPFP07098 398 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 HCKP08631 526 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 TCN2P20062 427 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 SLC2A5P22732 501 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF41P51814 821 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 PNLIPRP2P54317 469 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CDK10Q15131 360 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 GDPGP1Q6ZNW5 385 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 PRSS45Q7RTY3 260 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 FAM220AQ7Z4H9 259 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 LIX1LQ8IVB5 337 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 AP3S1Q92572 193 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 RFT1Q96AA3 541 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 SPTA1P02549 2419 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CENPXA8MT69 81 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 C9J4A7 227 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 ZFAND5O76080 213 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 ZFPL1O95159 310 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CER1O95813 267 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CTLA4P16410 223 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CRABP1P29762 137 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 GCH1P30793 250 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 SRP9P49458 86 aaKnown RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 TMEM176BQ3YBM2 270 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 LRFN4Q6PJG9 635 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 KMT5CQ86Y97 462 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 ARIH2OSQ8N7S6 290 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 OR4K17Q8NGC6 315 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 ATF6BQ99941 703 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 CDCP1Q9H5V8 836 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 SLC22A13Q9Y226 551 aa9.7□□□□□ -0.86
NEDD9-201ENST00000379433 COA3Q9Y2R0 106 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-201ENST00000379433 TLX3O43711 291 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 LDOC1O95751 146 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 ASAH2BP0C7U1 165 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 JMJD7P0C870 316 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 MECP2P51608 486 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 POLR2HP52434 150 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 FAM185AQ8N0U4 392 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TRMT10AQ8TBZ6 339 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 POLR1DQ9Y2S0 133 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 ACACAQ13085 2346 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TRAV36DV7A0A075B6V5 113 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 LNP1A1A4G5 178 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 NPIPA5E9PKD4 350 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TO15178 435 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 EEF1E1O43324 174 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 EIF4EP06730 217 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 OR2T7P0C7T2 308 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 SFXN4Q6P4A7 337 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 PLXDC2Q6UX71 529 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 PLPP5Q8NEB5 264 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 OR2T27Q8NH04 317 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TSEN15Q8WW01 171 aaKnown RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 RASL10BQ96S79 203 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 SLA2Q9H6Q3 261 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 SDHAF2Q9NX18 166 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 NLKQ9UBE8 527 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 TBC1D24Q9ULP9 559 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 NPIPA1Q9UND3 350 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 BAIAP2Q9UQB8 552 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 HIF3AQ9Y2N7 669 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 CEP295Q9C0D2 2601 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF729A6NN14 1252 aaPredicted RBP9.69□□□□□ -0.86
NEDD9-201ENST00000379433 J3QRE1 110 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 FADS1O60427 444 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 GLCEO94923 617 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 WNT11O96014 354 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 PNPP00491 289 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 CSF3P09919 207 aa9.69□□□□□ -0.86
NEDD9-201ENST00000379433 PRF1P14222 555 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms