RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 UBALD2Q8IYN6 164 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ACY3Q96HD9 319 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CFAP20Q9Y6A4 193 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 H0YGG7 62 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CTHP32929 405 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CDKN2AP42771 156 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CEACAM18A8MTB9 384 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 BOLA2-SMG1P6H3BVE0 249 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SOX14O95416 240 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 MICBQ29980 383 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM236Q5W0B7 351 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 DCBLD1Q8N8Z6 715 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR5D13Q8NGL4 314 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR51Q1Q8NH59 317 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TNRC6CQ9HCJ0 1690 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 EXOSC6Q5RKV6 272 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR51T1Q8NGJ9 327 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR2A5Q96R48 311 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 LTB4R2Q9NPC1 389 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TRAV1-1A0A0B4J248 108 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR5T1Q8NG75 326 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR5T3Q8NGG3 340 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TRAPPC2LH3BP13 241 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CD99P14209 185 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 HTR6P50406 440 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 FAM74A1Q5RGS3 127 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CLIP4Q8N3C7 705 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR52E1Q8NGJ3 308 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ASB16Q96NS5 453 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SIRT3Q9NTG7 399 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 LRFN1Q9P244 771 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 POM121BA6NF01 834 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 DGKZQ13574 1117 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CLEC1AQ8NC01 280 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ST8SIA4Q92187 359 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF700Q9H0M5 742 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SPTY2D1-AS1A0A0U1RR47 76 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 HIST1H3AP68431 136 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PDZK1IP1Q13113 114 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TEAD2Q15562 447 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CDCP1Q9H5V8 836 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ASPDHA6ND91 283 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 BORCS8Q96FH0 119 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 B9D1Q9UPM9 204 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PRF1P14222 555 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 AADACP22760 399 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 TOMM20LQ6UXN7 152 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR5AK3PQ8NH89 298 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CD99L2Q8TCZ2 262 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 MMP25Q9NPA2 562 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 VSX1Q9NZR4 365 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 POU2F3Q9UKI9 436 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PLA2G10O15496 165 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 BTN1A1Q13410 526 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SMN1Q16637 294 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RNF133Q8WVZ7 376 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1W2PPV4 95 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 OR5B21A6NL26 309 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RBMXL2O75526 392 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 SHC1P29353 583 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 IGSF11Q5DX21 431 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PRSS54Q6PEW0 395 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 LINC00114Q6XXX2 140 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RTN4RL1Q86UN2 441 aaPredicted RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CLEC3BP05452 202 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CISD3P0C7P0 127 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF28P17035 718 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 CMTM4Q8IZR5 234 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 BVESQ8NE79 360 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 GABRG3Q99928 467 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PLRG1O43660 514 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 FBLP22087 321 aaKnown RBP4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RAD52P43351 418 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RAB7AP51149 207 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 IQCJQ1A5X6 159 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 NPSR1Q6W5P4 371 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 PLPP7Q8NBV4 271 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 LMAN1LQ9HAT1 526 aa4.48□□□□□ -1.69
PCDH9-201ENST00000377861 RRP8O43159 456 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 GCGP01275 180 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF728P0DKX0 622 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PTGER4P35408 488 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CARD18P57730 90 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM41BQ5BJD5 291 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SPINT2O43291 252 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SLC16A7O60669 478 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 EPHA8P29322 1005 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 RPS23P62266 143 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 HTRA3P83110 453 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 C1QL4Q86Z23 238 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZBTB44Q8NCP5 570 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR52I2Q8NH67 350 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SPPL3Q8TCT6 385 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM100Q9NV29 134 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CD37P11049 281 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZXDCQ2QGD7 858 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 C18orf63Q68DL7 685 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 IAH1Q2TAA2 248 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms