RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 PRELID3BQ9Y3B1 194 aa16.21■□□□□ 0.19
CLSTN1-202ENST00000377298 R4GMQ9 66 aa16.21■□□□□ 0.19
CLSTN1-202ENST00000377298 ZNF92Q03936 586 aa16.21■□□□□ 0.19
CLSTN1-202ENST00000377298 DUSP2Q05923 314 aa16.21■□□□□ 0.19
CLSTN1-202ENST00000377298 A4GNTQ9UNA3 340 aa16.21■□□□□ 0.19
CLSTN1-202ENST00000377298 OR6C6A6NF89 314 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 OR2A2Q6IF42 318 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 PRSS41Q7RTY9 318 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF546Q86UE3 836 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 LACC1Q8IV20 430 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 SIAH3Q8IW03 269 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 CADM3Q8N126 398 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 PRSS35Q8N3Z0 413 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 MAFIPQ8WZ33 124 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 SLC6A13Q9NSD5 602 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 ASF1BQ9NVP2 202 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 FBXL4Q9UKA2 621 aa16.21■□□□□ 0.18
CLSTN1-202ENST00000377298 IGHV3-15A0A0B4J1V0 119 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ASPDHA6ND91 283 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 BCKDHBP21953 392 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 SNCAP37840 140 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 SLC17A1Q14916 467 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 OR5AS1Q8N127 324 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 BBS1Q8NFJ9 593 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 MED18Q9BUE0 208 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 B9D1Q9UPM9 204 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A0B4J2E0 115 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1B0GX12 115 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 C5orf49A4QMS7 147 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 LRP5LA4QPB2 252 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 CCR9P51686 369 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ACSM1Q08AH1 577 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF74Q16587 644 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 CELF2-AS1Q8N7Q2 184 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 OR11G2Q8NGC1 345 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 SMAP2Q8WU79 429 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 SMIM19Q96E16 107 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 NMNAT2Q9BZQ4 307 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 FGF20Q9NP95 211 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A096LPE4 126 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1W2PPZ6 126 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 USP51Q70EK9 711 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 DUSP15Q9H1R2 295 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 GPR84Q9NQS5 396 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF355PQ9NSJ1 428 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 TIMM8BQ9Y5J9 83 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 TRGV5A0A0B4J1U4 118 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 OXA1LQ15070 435 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 EIF2S3LQ2VIR3 472 aaKnown RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 JMJD6Q6NYC1 403 aaPredicted RBP16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 SCPEP1Q9HB40 452 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ATP23Q9Y6H3 246 aa16.2■□□□□ 0.18
CLSTN1-202ENST00000377298 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 TRABD2BA6NFA1 517 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 LAIR1Q6GTX8 287 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 WDR74Q6RFH5 385 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 SIGLEC11Q96RL6 698 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 JAM3Q9BX67 310 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ZMAT3Q9HA38 289 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 TCRBP04435 133 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 CDK5R1Q15078 307 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 PAQR6Q6TCH4 344 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 TMPRSS11FQ6ZWK6 438 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 OR4C3Q8NH37 302 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ROBO4Q8WZ75 1007 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ACER2Q5QJU3 275 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 LHFPL2Q6ZUX7 228 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ANKRD9Q96BM1 317 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ANKRD61A6NGH8 418 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 MSTNO14793 375 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 GSTP1P09211 210 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 S100A7P31151 101 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 SRSF5Q13243 272 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 OR51F2Q8NH61 342 aa16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF764Q96H86 408 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-202ENST00000377298 RAD52P43351 418 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 EDDM3AQ14507 147 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 OR2I1PQ8NGU4 316 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 HRASLSQ9HDD0 168 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1W2PPV4 95 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 TUSC2O75896 110 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 IFNA4P05014 189 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 SERPINA7P05543 415 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 GP2P55259 537 aaKnown RBP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF117Q03924 483 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 EIF4EBP2Q13542 120 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 POU4F3Q15319 338 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF766Q5HY98 468 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF573Q86YE8 665 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 NOXO1Q8NFA2 376 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF649Q9BS31 505 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 BANF2Q9H503 90 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 ALG1L2C9J202 215 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 NRASP01111 189 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 CTXN2P0C2S0 81 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 PLXDC2Q6UX71 529 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 MSRB3Q8IXL7 192 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms