RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TEX13CA0A0J9YWL9 993 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 CTLA4P16410 223 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 TNFSF4P23510 183 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 GATA3P23771 443 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 SDHAP31040 664 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 AQP6Q13520 282 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 KRR1Q13601 381 aaKnown RBP17.81■□□□□ 0.44
VSX1-201ENST00000376707 SPRNQ5BIV9 151 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 VASH1Q7L8A9 365 aaPredicted RBP17.81■□□□□ 0.44
VSX1-201ENST00000376707 C1QL2Q7Z5L3 287 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 ST7LQ8TDW4 575 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 RASD2Q96D21 266 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 PYURFQ96I23 114 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 PLEK2Q9NYT0 353 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 PURGQ9UJV8 347 aaKnown RBP17.81■□□□□ 0.44
VSX1-201ENST00000376707 ARL2BPQ9Y2Y0 163 aa17.81■□□□□ 0.44
VSX1-201ENST00000376707 SLC16A7O60669 478 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 DIRAS1O95057 198 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 FXYD6P3P58550 94 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 ACTG1P63261 375 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 LCN2P80188 198 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 CDK5R2Q13319 367 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 SAMD4BQ5PRF9 694 aaKnown RBP17.8■□□□□ 0.44
VSX1-201ENST00000376707 GLB1L2Q8IW92 636 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 RSRC1Q96IZ7 334 aaKnown RBP17.8■□□□□ 0.44
VSX1-201ENST00000376707 COG8Q96MW5 612 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 DCLRE1CQ96SD1 692 aaKnown RBP17.8■□□□□ 0.44
VSX1-201ENST00000376707 SYT4Q9H2B2 425 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 POFUT1Q9H488 388 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 KRCC1Q9NPI7 259 aaPredicted RBP17.8■□□□□ 0.44
VSX1-201ENST00000376707 VSX1Q9NZR4 365 aaPredicted RBP17.8■□□□□ 0.44
VSX1-201ENST00000376707 ASH2LQ9UBL3 628 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 TAGLN3Q9UI15 199 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 NPTNQ9Y639 398 aa17.8■□□□□ 0.44
VSX1-201ENST00000376707 KHDRBS3O75525 346 aaKnown RBP17.79■□□□□ 0.44
VSX1-201ENST00000376707 ADRA2CP18825 462 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 GYS2P54840 703 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 SMIM11AP58511 58 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 HILS1P60008 231 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 GNGT1P63211 74 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 KRT72Q14CN4 511 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 SPATS1Q496A3 300 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 OTPQ5XKR4 325 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 C1orf94Q6P1W5 598 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 DPY19L2P2Q6ZN68 376 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 USP43Q70EL4 1123 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 ADCK1Q86TW2 530 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 OR2Z1Q8NG97 314 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 NANPQ8TBE9 248 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 CMBLQ96DG6 245 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 JMJD8Q96S16 334 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 CDRT15Q96T59 188 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 C7orf69Q9H7B7 122 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 TMEM106BQ9NUM4 274 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 ARL8BQ9NVJ2 186 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 DCAF16Q9NXF7 216 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 COA3Q9Y2R0 106 aaPredicted RBP17.79■□□□□ 0.44
VSX1-201ENST00000376707 STARD10Q9Y365 291 aa17.79■□□□□ 0.44
VSX1-201ENST00000376707 UNC119BA6NIH7 251 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 TRIM77I1YAP6 450 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 SOCS2O14508 198 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 TXNDC12O95881 172 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 SBK2P0C263 348 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 TNFRSF1AP19438 455 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 KITLGP21583 273 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 LSM6P62312 80 aaKnown RBP17.78■□□□□ 0.44
VSX1-201ENST00000376707 OR52J3Q8NH60 311 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 SLC7A6Q92536 515 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 SAMD8Q96LT4 415 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 GPA33Q99795 319 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 SUCNR1Q9BXA5 334 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 AURKCQ9UQB9 309 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 POLR1DQ9Y2S0 133 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 IER3IP1Q9Y5U9 82 aa17.78■□□□□ 0.44
VSX1-201ENST00000376707 ARPC2O15144 300 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 SURF4O15260 269 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 FOXH1O75593 365 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 DCTN3O75935 186 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 IGHV2-70P01814 119 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 MSX2P35548 267 aaPredicted RBP17.77■□□□□ 0.44
VSX1-201ENST00000376707 HNRNPA0Q13151 305 aaKnown RBP17.77■□□□□ 0.44
VSX1-201ENST00000376707 SMARCD3Q6STE5 483 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 Q6ZR03 302 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 BPIFB2Q8N4F0 458 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 SPICQ8N5J4 248 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 OR1F12Q8NHA8 337 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 HAVCR1Q96D42 359 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 NSMCE2Q96MF7 247 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 NUAK2Q9H093 628 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 NDE1Q9NXR1 346 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 V9GYQ6 96 aa17.77■□□□□ 0.44
VSX1-201ENST00000376707 OR6C6A6NF89 314 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 IMPA2O14732 288 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 GADD45GO95257 159 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 CENPAP49450 140 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 RPS6KA3P51812 740 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 C16orf89Q6UX73 402 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 PTCHD4Q6ZW05 846 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms