RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 F10P00742 488 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ABOP16442 354 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 IL11P20809 199 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 GALP22466 123 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CLDN6P56747 220 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 RPL27P61353 136 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 DHRS2Q13268 280 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SMCO1Q147U7 214 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PGAM5Q96HS1 289 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF578Q96N58 590 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 B3GALT1Q9Y5Z6 326 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TRAV36DV7A0A075B6V5 113 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 D6RAR5 112 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SEC14L5O43304 696 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FCARP24071 287 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RSPO4Q2I0M5 234 aaPredicted RBP12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MOGAT2Q3SYC2 334 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LSMEM1Q8N8F7 131 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ZSCAN1Q8NBB4 408 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR4K15Q8NH41 348 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OTOSQ8NHW6 89 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FGF11Q92914 225 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 HAO2Q9NYQ3 351 aa12.96□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FAM221AA4D161 298 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LINC00862A6NCI5 91 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FOXS1O43638 330 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 NMBP08949 121 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GRAMD2AQ8IUY3 354 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LRRC61Q9BV99 259 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 KLHL13Q9P2N7 655 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FBXO9Q9UK97 447 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM184BQ9Y519 407 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ETV7Q9Y603 341 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SULT1B1O43704 296 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SPINK2P20155 84 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 RNASE11Q8TAA1 199 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TCTN2Q96GX1 697 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ANKRD10Q9NXR5 420 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CTSFQ9UBX1 484 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ROS1P08922 2347 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 THSD7BQ9C0I4 1608 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ZNF749O43361 778 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MGAT2Q10469 447 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FAM76BQ5HYJ3 339 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CD300LFQ8TDQ1 290 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PIGTQ969N2 578 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 MESP1Q9BRJ9 268 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FGF21Q9NSA1 209 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ASH2LQ9UBL3 628 aa12.95□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CDK2AP1O14519 115 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CSTBP04080 98 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CRABP1P29762 137 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SERPINF1P36955 418 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PPP1R1AQ13522 171 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CHRFAM7AQ494W8 412 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FHL5Q5TD97 284 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ALKBH2Q6NS38 261 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SLC22A18ASQ8N1D0 253 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR5H2Q8NGV7 314 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LMAN1LQ9HAT1 526 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CSAG2Q9Y5P2 127 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM225BP0DP42 221 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GAAP10253 952 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GABRA1P14867 456 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ZNF93P35789 620 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 YPEL5P62699 121 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GLIPR1L1Q6UWM5 242 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CLEC9AQ6UXN8 241 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 ADGRE4PQ86SQ3 457 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 CMIPQ8IY22 773 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR8B4Q96RC9 309 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GFI1Q99684 422 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PTGES2Q9H7Z7 377 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 FAM221BA6H8Z2 402 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 GPR31O00270 319 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 DRD1P21728 446 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 BDKRB2P30411 391 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 NR0B2Q15466 257 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PRSS35Q8N3Z0 413 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 BMPERQ8N8U9 685 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PNLDC1Q8NA58 520 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 OR52N4Q8NGI2 321 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
TNFRSF1B-201ENST00000376259 PLXNB3Q9ULL4 1909 aa12.93□□□□□ -0.34
TNFRSF1B-201ENST00000376259 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms