RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PPP1R1AQ13522 171 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 MARCH3Q86UD3 253 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF679Q8IYX0 411 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 GVQW1Q8N7I0 195 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 RNF128Q8TEB7 428 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC25A44Q96H78 314 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 FBXO9Q9UK97 447 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 BDP1A6H8Y1 2624 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 FREM3P0C091 2139 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 C10orf142B7Z368 130 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 SCDO00767 359 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 XKRYO14609 159 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ATG12O94817 140 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 OR6A2O95222 327 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 IGLV3-19P01714 112 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CLPSP04118 112 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 AKR1D1P51857 326 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 FUT7Q11130 342 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 OR7A5Q15622 319 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CDNFQ49AH0 187 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 KIAA0895LQ68EN5 471 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ACOT7LQ6ZUV0 252 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 KCTD9Q7L273 389 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CASTOR1Q8WTX7 329 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ASB12Q8WXK4 309 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ADOQ96SZ5 270 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 MICU1Q9BPX6 476 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 EDEM2Q9BV94 578 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 GAREM1Q9H706 876 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 PRMT8Q9NR22 394 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 EEF1E1-BLOC1S5C9J1V9 151 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 UTS2O95399 124 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC25A4P12235 298 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 CASRP41180 1078 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 C1orf61Q13536 156 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 TEX30Q5JUR7 227 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 FDX2Q6P4F2 183 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 TAF8Q7Z7C8 310 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 OOSP2Q86WS3 158 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 LDLRAD3Q86YD5 345 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 CBLN2Q8IUK8 224 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 EDAQ92838 391 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 NXF5Q9H1B4 397 aaKnown RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM184BQ9Y519 407 aaPredicted RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 TDRD6O60522 2096 aaKnown RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SULT2B1O00204 365 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SULT1C2O00338 296 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 CTLA4P16410 223 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 ZBTB25P24278 435 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 AKT2P31751 481 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 ADAM8P78325 824 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 INSM1Q01101 510 aaPredicted RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF345Q14585 488 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 ACKR1Q16570 336 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC18B1Q6NT16 456 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 PAPD4Q6PIY7 484 aaKnown RBP12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 METTL21AQ8WXB1 218 aa12.66□□□□□ -0.38
CLCNKA-202ENST00000375692 PCNX3Q9H6A9 2034 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 CDC14CA4D256 554 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 OR14I1A6ND48 311 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 CLDN4O14493 209 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 PHYHO14832 338 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 FADS1O60427 444 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 CD74P04233 296 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 ELOCQ15369 112 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 C8orf44Q96CB5 159 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 ABHD6Q9BV23 337 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 PIGMQ9H3S5 423 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 MBD2Q9UBB5 411 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 MRPS33Q9Y291 106 aaKnown RBP12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 SEC16AO15027 2179 aa12.65□□□□□ -0.38
CLCNKA-202ENST00000375692 LOC101059948A0A1B0GTJ6 334 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 OR2AT4A6NND4 320 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 H7C2Y5 167 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 CD2P06729 351 aa12.65□□□□□ -0.39
CLCNKA-202ENST00000375692 IGFBP3P17936 291 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms