RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 THEM4Q5T1C6 240 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 ZNF57Q68EA5 555 aaPredicted RBP7.38□□□□□ -1.23
UBR4-202ENST00000375224 ELP2Q6IA86 826 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 SLC18B1Q6NT16 456 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 KCTD18Q6PI47 426 aaPredicted RBP7.38□□□□□ -1.23
UBR4-202ENST00000375224 LYPD4Q6UWN0 246 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 H1FNTQ75WM6 255 aaPredicted RBP7.38□□□□□ -1.23
UBR4-202ENST00000375224 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 ZNF227Q86WZ6 799 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 DUSP18Q8NEJ0 188 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 OTOSQ8NHW6 89 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 ZNF417Q8TAU3 575 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 POC1BQ8TC44 478 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 THEM6Q8WUY1 208 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 TCTEX1D2Q8WW35 142 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 RFT1Q96AA3 541 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 ZNF587Q96SQ5 575 aaPredicted RBP7.38□□□□□ -1.23
UBR4-202ENST00000375224 HDHD2Q9H0R4 259 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 METTL7AQ9H8H3 244 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 APMAPQ9HDC9 416 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 NOX4Q9NPH5 578 aa7.38□□□□□ -1.23
UBR4-202ENST00000375224 FTCDNL1E5RQL4 147 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 DCTN6O00399 190 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 LYRM1O43325 122 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 UPK3AO75631 287 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 RPP14O95059 124 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 EIF4EP06730 217 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 FBXO45P0C2W1 286 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 DNASE1P24855 282 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 STOMP27105 288 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 KIR2DL3P43628 341 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 MC2RQ01718 297 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 NTRK2Q16620 822 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SLC25A35Q3KQZ1 300 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SAPCD1Q5SSQ6 148 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 FAM69BQ5VUD6 431 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 DPY19L4Q7Z388 723 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ZNF671Q8TAW3 534 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 RBP7Q96R05 134 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 OPA3Q9H6K4 179 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 GALNT9Q9HCQ5 603 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 GHRLQ9UBU3 117 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SH3BGRL2Q9UJC5 107 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 FBXO4Q9UKT5 387 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 LOC102723996A0A087X1L8 192 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 TMEM200CA6NKL6 621 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 C17orf51A8MQB3 221 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 C1orf196B1AJZ1 125 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 NPIPA5E9PKD4 350 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 AIPO00170 330 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 AKR7A3O95154 331 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ZFPL1O95159 310 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 UBL3O95164 117 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ABHD16AO95870 558 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 HRGP04196 525 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SPP1P10451 314 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 EXT1Q16394 746 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 FDX2Q6P4F2 183 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ATRAIDQ6UW56 229 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 RBMS3Q6XE24 437 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 C3P1Q6ZMU1 363 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 C16orf47Q6ZP98 133 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 STPG2Q8N412 459 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 RNF31Q96EP0 1072 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 DERL3Q96Q80 235 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 OR11A1Q9GZK7 315 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 TCF7L1Q9HCS4 588 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 TREM2Q9NZC2 230 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 AKAP7Q9P0M2 348 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 NPIPA1Q9UND3 350 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 A0A1W2PPK0 400 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ACOD1A6NK06 481 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 C4orf47A7E2U8 309 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 DISC1C4P0D8 188 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SLC16A7O60669 478 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 PLGP00747 810 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 FOXL2P58012 376 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 NANOS3P60323 173 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 GLO1Q04760 184 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ZFP36L1Q07352 338 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 UBE2NLQ5JXB2 153 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 CLEC2AQ6UVW9 174 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 MAML2Q8IZL2 1156 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 EDARADDQ8WWZ3 215 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 SPACA9Q96E40 222 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 DCBLD2Q96PD2 775 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 TSNAXQ99598 290 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 THAP7Q9BT49 309 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 OPN3Q9H1Y3 402 aaPredicted RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 CHST11Q9NPF2 352 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ALKBH4Q9NXW9 302 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 CAMK2AQ9UQM7 478 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 B3GALT5Q9Y2C3 310 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 AK6Q9Y3D8 172 aaKnown RBP7.37□□□□□ -1.23
UBR4-202ENST00000375224 WIF1Q9Y5W5 379 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 V9GY05 133 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 ADAMTS9Q9P2N4 1935 aa7.37□□□□□ -1.23
UBR4-202ENST00000375224 TRBV5-5A0A0J9YX44 114 aa7.36□□□□□ -1.23
UBR4-202ENST00000375224 ZNF593O00488 134 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms