RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
USP49-201ENST00000373006 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 C5orf51A6NDU8 294 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 RENP00797 406 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 EGR3Q06889 387 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 EIF2B1Q14232 305 aaKnown RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 ZNF528Q3MIS6 628 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 OR5AP2Q8NGF4 316 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 OTOSQ8NHW6 89 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 BADQ92934 168 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 HRASLS2Q9NWW9 162 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 GDE1Q9NZC3 331 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ZNF208O43345 1280 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ADH1BP00325 375 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ELOCQ15369 112 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 VWA2Q5GFL6 755 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 PAPD4Q6PIY7 484 aaKnown RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ADAD2Q8NCV1 583 aaKnown RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 SLC25A44Q96H78 314 aaPredicted RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 FAM60AQ9NP50 221 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 KLK3P07288 261 aaPredicted RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 MELTFP08582 738 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ASAH2BP0C7U1 165 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 MAOAP21397 527 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 OR2B8PP59922 312 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 S100A12P80511 92 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 RUNX3Q13761 415 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 EEF1A1P5Q5VTE0 462 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 FAM166AQ6J272 317 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 UQCC3Q6UW78 93 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 TMEM184AQ6ZMB5 413 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ATG4DQ86TL0 474 aaPredicted RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 METTL27Q8N6F8 245 aaPredicted RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 OR6S1Q8NH40 331 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 HOXB13Q92826 284 aaPredicted RBP12.32□□□□□ -0.44
USP49-201ENST00000373006 TAAR8Q969N4 342 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 SLC25A36Q96CQ1 311 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 TMEM14AQ9Y6G1 99 aa12.32□□□□□ -0.44
USP49-201ENST00000373006 A0A1B0GV90 55 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 LMX1BO60663 402 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 ERCC1P07992 297 aaPredicted RBP12.31□□□□□ -0.44
USP49-201ENST00000373006 NQO2P16083 231 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 ZBTB25P24278 435 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 RAB38P57729 211 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 WBP2NLQ6ICG8 309 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 LYG2Q86SG7 212 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 CHST4Q8NCG5 386 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 ZNF563Q8TA94 476 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 BAHD1Q8TBE0 780 aaPredicted RBP12.31□□□□□ -0.44
USP49-201ENST00000373006 EDAQ92838 391 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 MRGPRFQ96AM1 343 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 C9orf170A2RU37 121 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 OR6A2O95222 327 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 GDI1P31150 447 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 PPM1FP49593 454 aaPredicted RBP12.31□□□□□ -0.44
USP49-201ENST00000373006 KLHL26Q53HC5 615 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 ZNF542PQ5EBM4 170 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
USP49-201ENST00000373006 MED25Q71SY5 747 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 YAF2Q8IY57 180 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 EDEM2Q9BV94 578 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 TGIF2Q9GZN2 237 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 CSAG2Q9Y5P2 127 aa12.31□□□□□ -0.44
USP49-201ENST00000373006 TACR3P29371 465 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 RFC3P40938 356 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 PNLIPRP2P54317 469 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 SSBP1Q04837 148 aaKnown RBP12.3□□□□□ -0.44
USP49-201ENST00000373006 NKAPLQ5M9Q1 402 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 ELP5Q8TE02 316 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 NUDCD2Q8WVJ2 157 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 C14orf79Q96F83 325 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 K7EQS6 105 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 SLC16A7O60669 478 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
USP49-201ENST00000373006 WISP1O95388 367 aa12.3□□□□□ -0.44
USP49-201ENST00000373006 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms