RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 OR10K2Q6IF99 312 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 CALHM3Q86XJ0 350 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 OR4A16Q8NH70 328 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 LAT2Q9GZY6 243 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF385DQ9H6B1 395 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PATZ1Q9HBE1 687 aaKnown RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 IL21Q9HBE4 155 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF629Q9UEG4 869 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 MMP17Q9ULZ9 603 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 MAGEB4O15481 346 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-203ENST00000372407 PEX11BO96011 259 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 TCN2P20062 427 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 PSMB6P28072 239 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 LAP3P28838 519 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 CHRNB4P30926 498 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 CLDN20P56880 219 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 GPR85P60893 370 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 RAB11AP62491 216 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 LINC00696Q6ZRV3 163 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SFT2D1Q8WV19 159 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 ELSPBP1Q96BH3 223 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 KCNJ15Q99712 375 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SIT1Q9Y3P8 196 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 TUSC2O75896 110 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 GSTP1P09211 210 aaKnown RBP10.41□□□□□ -0.74
PTPRF-203ENST00000372407 CTXN2P0C2S0 81 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF92Q03936 586 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 EGR3Q06889 387 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 BAK1Q16611 211 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 PCK2Q16822 640 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 VHLLQ6RSH7 139 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 USP51Q70EK9 711 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 OR51E1Q8TCB6 317 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 MVB12AQ96EY5 273 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 RNF170Q96K19 258 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SIGLEC11Q96RL6 698 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 C6orf106Q9H6K1 298 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SLAMF7Q9NQ25 335 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 GHRLQ9UBU3 117 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 DUSP13Q9UII6 198 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SNRPGP15A8MWD9 76 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 TAAR5O14804 337 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 TAGLN2P37802 199 aaKnown RBP10.41□□□□□ -0.74
PTPRF-203ENST00000372407 SYT13Q7L8C5 426 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 FJX1Q86VR8 437 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF680Q8NEM1 530 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 ST8SIA1Q92185 356 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 INTS12Q96CB8 462 aaKnown RBP10.41□□□□□ -0.74
PTPRF-203ENST00000372407 HIPK2Q9H2X6 1198 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 KCND3Q9UK17 655 aa10.41□□□□□ -0.74
PTPRF-203ENST00000372407 OR5H14A6NHG9 310 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 KLRC4-KLRK1H3BQV0 150 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 TMEM127O75204 238 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 OLFM2O95897 454 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 HLA-HP01893 362 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 CBR1P16152 277 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 RPS27P42677 84 aaKnown RBP10.4□□□□□ -0.74
PTPRF-203ENST00000372407 MAGEB1P43366 347 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 OR10A3P58181 314 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 NKG7Q16617 165 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 Q6ZNB5 142 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 OR2AK2Q8NG84 335 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 STT3BQ8TCJ2 826 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 ZCCHC4Q9H5U6 513 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 GAREM1Q9H706 876 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 HRH3Q9Y5N1 445 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 EFSO43281 561 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 RGS11O94810 467 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 GUSBP08236 651 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 QDPRP09417 244 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 SOX18P35713 384 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 DBPQ10586 325 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-203ENST00000372407 CPEB2Q7Z5Q1 589 aaKnown RBP10.4□□□□□ -0.74
PTPRF-203ENST00000372407 TMEM178AQ8NBL3 297 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 OR13C5Q8NGS8 318 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 OR2G3Q8NGZ4 309 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 TMED6Q8WW62 240 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-203ENST00000372407 A0A1B0GUH1 482 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 F6UZH7 168 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 H0YIG0 161 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 SPINT2O43291 252 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 H2AFB1P0C5Y9 115 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 GLI4P10075 376 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 TBPP20226 339 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 NFYBP25208 207 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 PSMB3P49720 205 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 C2orf76Q3KRA6 126 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 APH1AQ96BI3 265 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 CSAG2Q9Y5P2 127 aa10.4□□□□□ -0.74
PTPRF-203ENST00000372407 A0A0A6YYJ9 748 aa10.4□□□□□ -0.75
PTPRF-203ENST00000372407 RAD52P43351 418 aa10.4□□□□□ -0.75
PTPRF-203ENST00000372407 RBPJQ06330 500 aa10.4□□□□□ -0.75
PTPRF-203ENST00000372407 PDZK1IP1Q13113 114 aa10.4□□□□□ -0.75
PTPRF-203ENST00000372407 FAM53BQ14153 422 aa10.4□□□□□ -0.75
PTPRF-203ENST00000372407 TRIM61Q5EBN2 209 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms