RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TMEM235A6NFC5 223 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 A6NJ64 397 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 FTCDNL1E5RQL4 147 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 LDLRAD4O15165 306 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 ISG15P05161 165 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 OR1D5P58170 312 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 UBXN2BQ14CS0 331 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 NR0B2Q15466 257 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 ATPAF1Q5TC12 328 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-202ENST00000372237 DNM1P34Q6PK57 102 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF704Q6ZNC4 412 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-202ENST00000372237 LANCL3Q6ZV70 420 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 SLC51BQ86UW2 128 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 PDZD9Q8IXQ8 264 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 BEST3Q8N1M1 668 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF441Q8N8Z8 693 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 STEAP2Q8NFT2 490 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 OR1J2Q8NGS2 313 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 NKD1Q969G9 470 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 LMAN1LQ9HAT1 526 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 FBXL2Q9UKC9 423 aa17.13■□□□□ 0.33
TMEM53-202ENST00000372237 TMEM265A0A087WTH1 108 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 A6NIZ1 184 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 OR6C76A6NM76 312 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 KRBOX1C9JBD0 128 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 NPIPA5E9PKD4 350 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 LMO7DNF2Z398 122 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF28P17035 718 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 MPGP29372 298 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 RAP1BP61224 184 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 RAP1AP62834 184 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF546Q86UE3 836 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF584Q8IVC4 421 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 NKAIN3Q8N8D7 197 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ACBD4Q8NC06 268 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 OR5M9Q8NGP3 310 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 KLK13Q9UKR3 277 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 NPIPA1Q9UND3 350 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 A8MXK9 166 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 MS4A18H0YCH9 400 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 TEX46H3BTG2 121 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 LMX1BO60663 402 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 CSN2P05814 226 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF735P0CB33 412 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 HNRNPKP61978 463 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMEM53-202ENST00000372237 MS4A18Q3C1V0 323 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 TMEM244Q5VVB8 128 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 PAPD4Q6PIY7 484 aaKnown RBP17.12■□□□□ 0.33
TMEM53-202ENST00000372237 OVCH2Q7RTZ1 564 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 OR4D6Q8NGJ1 314 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 OR1S1Q8NH92 325 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ST7LQ8TDW4 575 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 EDAQ92838 391 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 CENPMQ9NSP4 180 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF230Q9UIE0 474 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-202ENST00000372237 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 CA14Q9ULX7 337 aa17.12■□□□□ 0.33
TMEM53-202ENST00000372237 TRAV14DV4A0A0A6YYC5 116 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 LOC390937A0A1W2PQ73 354 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 SMAD9O15198 467 aaKnown RBP17.11■□□□□ 0.33
TMEM53-202ENST00000372237 CD74P04233 296 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 FOLR1P15328 257 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 AGTR1P30556 359 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 DHRS2Q13268 280 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 OR7A5Q15622 319 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 SMAD2Q15796 467 aaKnown RBP17.11■□□□□ 0.33
TMEM53-202ENST00000372237 C1orf100Q5SVJ3 147 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 OR4S1Q8NGB4 309 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 ASB10Q8WXI3 467 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 ARL5BQ96KC2 179 aa17.11■□□□□ 0.33
TMEM53-202ENST00000372237 ZNF107Q9UII5 783 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-202ENST00000372237 C2orf72A6NCS6 295 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 METTL21EPA6NDL7 271 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 METTL12A8MUP2 240 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 LGALS8O00214 317 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 P2RY10O00398 339 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 EIF1AYO14602 144 aaKnown RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 TSPAN4O14817 238 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 NUDT21O43809 227 aaKnown RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 RLN2P04090 185 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 PTGS2P35354 604 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 DAP3P51398 398 aaKnown RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 OGFOD3Q6PK18 319 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 C17orf107Q6ZR85 190 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 SHISA6Q6ZSJ9 500 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 PTX4Q96A99 478 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 FOXRED1Q96CU9 486 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 DMRTA2Q96SC8 542 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 NPAS1Q99742 590 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 SLC6A7Q99884 636 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 MYOZ1Q9NP98 299 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 A0A1B0GX78 115 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 HLA-AP01891 365 aaKnown RBP17.1■□□□□ 0.33
TMEM53-202ENST00000372237 FGF2P09038 288 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 H2BFMP0C1H6 154 aa17.1■□□□□ 0.33
TMEM53-202ENST00000372237 UBCP0CG48 685 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms