RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 CD2P06729 351 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 FREM3P0C091 2139 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 COX6A1P12074 109 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 NR2C1P13056 603 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 FSTP19883 344 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 RAG2P55895 527 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 SSPNQ14714 243 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 PLEKHN1Q494U1 663 aaPredicted RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 HES5Q5TA89 166 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 CMTM4Q8IZR5 234 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 ARMC10Q8N2F6 343 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 POC1BQ8TC44 478 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 DEDD2Q8WXF8 326 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 TMEM106AQ96A25 262 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 UPRTQ96BW1 309 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 HAVCR1Q96D42 359 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 S100A16Q96FQ6 103 aaKnown RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 AMELYQ99218 206 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 LIN7BQ9HAP6 207 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 FOXJ3Q9UPW0 622 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 PTRH2Q9Y3E5 179 aaKnown RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 NUBP2Q9Y5Y2 271 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
LDB3-204ENST00000372066 A0A0B4J293 547 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 LOC102725191A0A1B0GVB3 256 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 GABARAPH6UMI1 98 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 DHFRP00374 187 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 UMODP07911 640 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 HLA-DOBP13765 273 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 IL11P20809 199 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 DCTDP32321 178 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 FOLR3P41439 243 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 SOX2P48431 317 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 ART1P52961 327 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 MYBPHQ13203 477 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 BCL2A1Q16548 175 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 SLC36A2Q495M3 483 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 CATSPERDQ86XM0 798 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 UEVLDQ8IX04 471 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 TCTE3Q8IZS6 198 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 CISD2Q8N5K1 135 aaKnown RBP12.52□□□□□ -0.4
LDB3-204ENST00000372066 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 SNRNP40Q96DI7 357 aaKnown RBP12.52□□□□□ -0.4
LDB3-204ENST00000372066 SLC25A38Q96DW6 304 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 FER1L6-AS2Q96M78 137 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 IP6K3Q96PC2 410 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 RBP7Q96R05 134 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 NPAS1Q99742 590 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 STEAP1Q9UHE8 339 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 LRP12Q9Y561 859 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 ALG5Q9Y673 324 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 R4GMQ9 66 aa12.52□□□□□ -0.4
LDB3-204ENST00000372066 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.4
LDB3-204ENST00000372066 UTP20O75691 2785 aaKnown RBP12.52□□□□□ -0.41
LDB3-204ENST00000372066 TEX15Q9BXT5 2789 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 A0A0B4J203 849 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 H3BML4 177 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 LANCL1O43813 399 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 KLF7O75840 302 aaPredicted RBP12.52□□□□□ -0.41
LDB3-204ENST00000372066 GPANK1O95872 356 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 ISG15P05161 165 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 ACHEP22303 614 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 RPS27P42677 84 aaKnown RBP12.52□□□□□ -0.41
LDB3-204ENST00000372066 SSR4P51571 173 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 TOMM20Q15388 145 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 ZNF704Q6ZNC4 412 aaPredicted RBP12.52□□□□□ -0.41
LDB3-204ENST00000372066 KRT74Q7RTS7 529 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 UBE2J2Q8N2K1 259 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 CLEC1AQ8NC01 280 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 OR10H5Q8NGA6 315 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 NTNG2Q96CW9 530 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 ZNF486Q96H40 463 aaPredicted RBP12.52□□□□□ -0.41
LDB3-204ENST00000372066 ANGPTL4Q9BY76 406 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 CKLFQ9UBR5 152 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 OR5V1Q9UGF6 321 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 HS3ST3B1Q9Y662 390 aa12.52□□□□□ -0.41
LDB3-204ENST00000372066 MED13Q9UHV7 2174 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 KIAA1549Q9HCM3 1950 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 NBPF19A0A087WUL8 3843 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 MEGF11A6BM72 1044 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 SRSF10O75494 262 aaKnown RBP12.51□□□□□ -0.41
LDB3-204ENST00000372066 IGHG1P01857 330 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 GSTT2BP0CG30 244 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ARSBP15848 533 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 ADRA2CP18825 462 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 CAPZA1P52907 286 aa12.51□□□□□ -0.41
LDB3-204ENST00000372066 BIDP55957 195 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms