RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 A0A1W2PNR3 127 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 CEBPZOSA8MTT3 80 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ICMTO60725 284 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 RPS27P42677 84 aaKnown RBP10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ZIC1Q15915 447 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 VN1R4Q7Z5H5 301 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 OR1N1Q8NGS0 311 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 GPBAR1Q8TDU6 330 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 KIRREL1Q96J84 757 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 SIRT3Q9NTG7 399 aaPredicted RBP10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC5A6Q9Y289 635 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 A0A1W2PPV4 95 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 C2CD4DB7Z1M9 353 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 M0R135 149 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 LY75O60449 1722 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 SIX6O95475 246 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 MMP15P51511 669 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 HBG1P69891 147 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 HBG2P69892 147 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 HMGN3Q15651 99 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC16A12Q6ZSM3 486 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CADM4Q8NFZ8 388 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 IFI44Q8TCB0 444 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF799Q96GE5 643 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 POFUT1Q9H488 388 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 BANF2Q9H503 90 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 PRMT8Q9NR22 394 aaPredicted RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 MED29Q9NX70 200 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TIMM10BQ9Y5J6 103 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 FOCADQ5VW36 1801 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 COL4A5P29400 1685 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TMEM235A6NFC5 223 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR2F2O95006 317 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ALX3O95076 343 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 RPL35P42766 123 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF136P52737 540 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TAS2R30P59541 319 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR2F1Q13607 317 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 PCK2Q16822 640 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CORO6Q6QEF8 472 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 UBALD2Q8IYN6 164 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR4N2Q8NGD1 307 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR4C3Q8NH37 302 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 MMP25Q9NPA2 562 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC22A13Q9Y226 551 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 LRP5LA4QPB2 252 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKRD34BA5PLL1 514 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 PLPP2O43688 288 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CNR1P21554 472 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TGM4P49221 684 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 BTN1A1Q13410 526 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OGFOD3Q6PK18 319 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 TMUB2Q71RG4 321 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CARFQ8N187 725 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OIT3Q8WWZ8 545 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 INTS12Q96CB8 462 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CFHR5Q9BXR6 569 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 GPR84Q9NQS5 396 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 MRPS2Q9Y399 296 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 POLR2AP24928 1970 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CTXN2P0C2S0 81 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 PCMT1P22061 227 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 CRYBB2P43320 205 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 FAM27D1Q5T7N8 215 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR6K3Q8NGY3 331 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 RBPMSQ93062 196 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 SLAMF9Q96A28 289 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 C3orf49Q96BT1 292 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 C8orf44Q96CB5 159 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ZG16BQ96DA0 208 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 RBMXL1Q96E39 390 aaKnown RBP10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 OR8B4Q96RC9 309 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 GABRG3Q99928 467 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ERVMER34-1Q9H9K5 563 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 GHRLQ9UBU3 117 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 ARID1AO14497 2285 aa10.75□□□□□ -0.69
DEPDC1-201ENST00000370966 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 NRG2O14511 850 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 NXPH2O95156 264 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 CD79BP40259 229 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 FJX1Q86VR8 437 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 CPNE4Q96A23 557 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKRD10Q9NXR5 420 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC17A2O00624 439 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PHF1O43189 567 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 TGM1P22735 817 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 EBPQ15125 230 aaKnown RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 PRICKLE4Q2TBC4 344 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 ASB13Q8WXK3 278 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 ANKRD9Q96BM1 317 aaPredicted RBP10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 NGBQ9NPG2 151 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 GNG12Q9UBI6 72 aa10.74□□□□□ -0.69
DEPDC1-201ENST00000370966 QSER1Q2KHR3 1735 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms