RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SERPINA7P05543 415 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 KIR2DL3P43628 341 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CX3CR1P49238 355 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CRYBA2P53672 197 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 DYRK1AQ13627 763 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 GSG1LQ6UXU4 331 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 DGAT2L6Q6ZPD8 337 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 COX15Q7KZN9 410 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 GLCCI1Q86VQ1 547 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 OR52H1Q8NGJ2 320 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 LOXL4Q96JB6 756 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC6A15Q9H2J7 730 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 APMAPQ9HDC9 416 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 P4HTMQ9NXG6 502 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MYEF2Q9P2K5 600 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 KLHL13Q9P2N7 655 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF223Q9UK11 482 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A0A6YYH2 397 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CENPVL1A0A0U1RR11 272 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM230AA0A1W2PPH8 454 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A23A1A5C7 686 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 A6NJ64 397 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 B4E171 279 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MAGEB4O15481 346 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ARPC5O15511 151 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 DHHO43323 396 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 IGKV1D-16P01601 117 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 NAT1P18440 290 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CPT2P23786 658 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TSPAN7P41732 249 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MTCP1P56278 107 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 RAP2BP61225 183 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 VAMP2P63027 116 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MZT1Q08AG7 82 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MGAT2Q10469 447 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CAMK2BQ13554 666 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TOR2AQ5JU69 321 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF684Q5T5D7 378 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 DMKNQ6E0U4 476 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM199XQ6PEV8 388 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MKXQ8IYA7 352 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 BPIFB2Q8N4F0 458 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 PLPP7Q8NBV4 271 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ACBD4Q8NC06 268 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 NPEPL1Q8NDH3 523 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 OR1J2Q8NGS2 313 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ANGPTL6Q8NI99 470 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SMAP2Q8WU79 429 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MIB2Q96AX9 1013 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 APH1AQ96BI3 265 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 RAB3CQ96E17 227 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 RASL10BQ96S79 203 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC25A21Q9BQT8 299 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 AIFM2Q9BRQ8 373 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 AICDAQ9GZX7 198 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TSPAN10Q9H1Z9 355 aaPredicted RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 EMC7Q9NPA0 242 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 OCIAD1Q9NX40 245 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R3Q9NYW6 316 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ATPIF1Q9UII2 106 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FOXJ3Q9UPW0 622 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 WASF3Q9UPY6 502 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TCF20Q9UGU0 1960 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 POM121CA8CG34 1229 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 E9PI62 339 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ATP6V1G2-DDX39BF2Z307 99 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 F5H5P2 479 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OGG1O15527 345 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 DOK2O60496 412 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GP1BAP07359 652 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 RPL35P42766 123 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CASP6P55212 293 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 NKPD1Q17RQ9 610 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 PLCXD3Q63HM9 321 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TIGD3Q6B0B8 471 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 IDO2Q6ZQW0 420 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 PDZD9Q8IXQ8 264 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC71LQ8N9Z2 235 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OR1M1Q8NGA1 313 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OR13C5Q8NGS8 318 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 NINJ1Q92982 152 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 CPNE4Q96A23 557 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF775Q96BV0 537 aaPredicted RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM173AQ9BQD7 235 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 GPR87Q9BY21 358 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 TIMM10BQ9Y5J6 103 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MAP1BP46821 2468 aaKnown RBP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HPP00738 406 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 AKR1C4P17516 323 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 ALOX5APP20292 161 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 OR10A3P58181 314 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 S100A10P60903 97 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 RAC1P63000 192 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 LSM11P83369 360 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 MC2RQ01718 297 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms