RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF770Q6IQ21 691 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 C11orf88Q6PI97 169 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 LYPD4Q6UWN0 246 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 DRAM2Q6UX65 266 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 LRRN1Q6UXK5 716 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 SLC16A14Q7RTX9 510 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 VTCN1Q7Z7D3 282 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 VASH2Q86V25 355 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OR9A2Q8NGT5 310 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 RNASEH2CQ8TDP1 164 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 THEM6Q8WUY1 208 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF524Q96C55 264 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 SRMSQ9H3Y6 488 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 SIRT7Q9NRC8 400 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 MMP26Q9NRE1 261 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 CA10Q9NS85 328 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 CUTCQ9NTM9 273 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 RPL36Q9Y3U8 105 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 POMT1Q9Y6A1 747 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 SEC16AO15027 2179 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 NDUFS4O43181 175 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 UBL3O95164 117 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 C8orf89P0DMQ9 161 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 RAP1BP61224 184 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 NSUN5P2Q63ZY6 315 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 JMJD6Q6NYC1 403 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ARHGAP11AQ6P4F7 1023 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 MMP21Q8N119 569 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 PIGXQ8TBF5 258 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 TRMT10AQ8TBZ6 339 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 PCBD2Q9H0N5 130 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ZDHHC11Q9H8X9 412 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 EXOSC4Q9NPD3 245 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 DMRT3Q9NQL9 472 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 FARSAQ9Y285 508 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF724A8MTY0 619 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 SCAMP2O15127 329 aaKnown RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 LRRTM2O43300 516 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 CHST10O43529 356 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 SSNA1O43805 119 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM127O75204 238 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 IGHG3P01860 377 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 JMJD7P0C870 316 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 ETFAP13804 333 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 GPX2P18283 190 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 TNFRSF1BP20333 461 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 PPT1P50897 306 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 CCR6P51684 374 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 CRYBA2P53672 197 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 RPS18P62269 152 aaKnown RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 SORDQ00796 357 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 FABP5Q01469 135 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 BDH1Q02338 343 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 ZNHIT3Q15649 155 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 HMGN3Q15651 99 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 ARMC6Q6NXE6 501 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 HMGN2P46Q86SG4 172 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 C10orf111Q8N326 155 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 HSD17B11Q8NBQ5 300 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 OR2G2Q8NGZ5 317 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 OR51Q1Q8NH59 317 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 RAB8BQ92930 207 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 POLR2J2Q9GZM3 115 aaKnown RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 ACSS1Q9NUB1 689 aaPredicted RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 GPATCH2Q9NW75 528 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 FAM120CQ9NX05 1096 aaKnown RBP6.15□□□□□ -1.43
CSDE1-204ENST00000369530 CLEC2DQ9UHP7 191 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 SRPK3Q9UPE1 567 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 FLVCR1Q9Y5Y0 555 aa6.15□□□□□ -1.43
CSDE1-204ENST00000369530 IDSB3KWA1 339 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SEC14L6B5MCN3 397 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM150CB9EJG8 249 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 F8VVB4 439 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 F8VWA3 439 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 K7EP13 123 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SYT5O00445 386 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 AIFM1O95831 613 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 IGF2P01344 180 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 C1QCP02747 245 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 RAB5AP20339 215 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 APOBEC3AP31941 199 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 KDELR2P33947 212 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR1E2P47887 323 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 AVPR1BP47901 424 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 LIM2P55344 173 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 WNT4P56705 351 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 RPS25P62851 125 aaKnown RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SKP2Q13309 424 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 HEPACAMQ14CZ8 416 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 TRIM40Q6P9F5 258 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR2W3Q7Z3T1 314 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FDCSPQ8NFU4 85 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 DOK4Q8TEW6 326 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 C16orf78Q8WTQ4 265 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FEVQ99581 238 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FAIM2Q9BWQ8 316 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PDE7BQ9NP56 450 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 UQCC1Q9NVA1 299 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 COMMD3Q9UBI1 195 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SLC13A4Q9UKG4 626 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms