RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF12P17014 697 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 RBMXP38159 391 aaKnown RBP13.49□□□□□ -0.25
CKS1B-202ENST00000368436 LSM6P62312 80 aaKnown RBP13.49□□□□□ -0.25
CKS1B-202ENST00000368436 AQP6Q13520 282 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 AWAT1Q58HT5 328 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 TSEN54Q7Z6J9 526 aaKnown RBP13.49□□□□□ -0.25
CKS1B-202ENST00000368436 KLHL36Q8N4N3 616 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 RP9Q8TA86 221 aaKnown RBP13.49□□□□□ -0.25
CKS1B-202ENST00000368436 C22orf15Q8WYQ4 148 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 PTP4A1Q93096 173 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 COG8Q96MW5 612 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 DDX28Q9NUL7 540 aaKnown RBP13.49□□□□□ -0.25
CKS1B-202ENST00000368436 OR6C6A6NF89 314 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 A8MXK9 166 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 F5H0A9 414 aaPredicted RBP13.48□□□□□ -0.25
CKS1B-202ENST00000368436 XKRYO14609 159 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 PTP4A3O75365 173 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 BTG1P62324 171 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF154Q13106 437 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 ZMYND11Q15326 602 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 C8orf82Q6P1X6 216 aaPredicted RBP13.48□□□□□ -0.25
CKS1B-202ENST00000368436 POU5F2Q8N7G0 328 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 ITLN1Q8WWA0 313 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 SLC7A6Q92536 515 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF570Q96NI8 536 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 NMNAT1Q9HAN9 279 aaPredicted RBP13.48□□□□□ -0.25
CKS1B-202ENST00000368436 NRIP3Q9NQ35 241 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 PLEK2Q9NYT0 353 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 ARMCX1Q9P291 453 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 PPP1R3CQ9UQK1 317 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
CKS1B-202ENST00000368436 J3QW42 95 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 NME4O00746 187 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SURF4O15260 269 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SLC16A7O60669 478 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 RAC2P15153 192 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 ERFP50548 548 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SEC61A1P61619 476 aaKnown RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 KRR1Q13601 381 aaKnown RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 KCNMB1Q16558 191 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 CCDC92Q53HC0 331 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 FKBP9P1Q75LS8 142 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 DOK3Q7L591 496 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 RRM2BQ7LG56 351 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 GLB1L2Q8IW92 636 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SIGLECL1Q8N7X8 197 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SLC7A13Q8TCU3 470 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 RASD2Q96D21 266 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 HSH2DQ96JZ2 352 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 GPX7Q96SL4 187 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 HOPXQ9BPY8 73 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 NDEL1Q9GZM8 345 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 VSX1Q9NZR4 365 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-202ENST00000368436 ASH2LQ9UBL3 628 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF69Q9UC07 566 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 ATPIF1Q9UII2 106 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 SIGLEC7Q9Y286 467 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 PPIAL4AQ9Y536 164 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 ENPP4Q9Y6X5 453 aa13.47□□□□□ -0.25
CKS1B-202ENST00000368436 TMEM178BH3BS89 294 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 GSTA4O15217 222 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 KHDRBS3O75525 346 aaKnown RBP13.46□□□□□ -0.25
CKS1B-202ENST00000368436 NDUFB2O95178 105 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 SERPINA1P01009 418 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 HKR1P10072 659 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 SDHAP31040 664 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 MDH2P40926 338 aaKnown RBP13.46□□□□□ -0.25
CKS1B-202ENST00000368436 SLC7A2P52569 658 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 GUCY1A3Q02108 690 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 ARMCX4Q5H9R4 360 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 OTPQ5XKR4 325 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 CYP4Z1Q86W10 505 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 FAM46AQ96IP4 442 aaKnown RBP13.46□□□□□ -0.25
CKS1B-202ENST00000368436 OR2V2Q96R30 315 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 GPA33Q99795 319 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 SYT4Q9H2B2 425 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 GCM1Q9NP62 436 aa13.46□□□□□ -0.25
CKS1B-202ENST00000368436 COA3Q9Y2R0 106 aaPredicted RBP13.46□□□□□ -0.25
CKS1B-202ENST00000368436 DOCK11Q5JSL3 2073 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 A0A1W2PRQ8 180 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 IMPA2O14732 288 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 WNT2P09544 360 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 COX4I1P13073 169 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 CPT2P23786 658 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 PRTN3P24158 256 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 OMPP47874 163 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 RGS6P49758 472 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 GSK3BP49841 420 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 MMP16P51512 607 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 HIST1H3AP68431 136 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 PAX8Q06710 450 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 FOXL1Q12952 345 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 DGCR6Q14129 220 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms