RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 C9orf135Q5VTT2 229 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 SDHAF4Q5VUM1 108 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 KCTD16Q68DU8 428 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 STUMQ69YW2 141 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 SLC16A14Q7RTX9 510 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 NOXA1Q86UR1 476 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 PARGQ86W56 976 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 CROCCP3Q8IVE0 287 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 LRRC57Q8N9N7 239 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 HSD17B11Q8NBQ5 300 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OR4D5Q8NGN0 318 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OR4A4PQ8NGN8 299 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OR6N2Q8NGY6 317 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OR52E5Q8NH55 327 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OR51A7Q8NH64 312 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 RPL36ALQ969Q0 106 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 CREB3L1Q96BA8 519 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OTULINQ96BN8 352 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 LGALS12Q96DT0 336 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 ERGIC2Q96RQ1 377 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 TSNAXQ99598 290 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 UGT1A7Q9HAW7 530 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 UGT1A8Q9HAW9 530 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM45AQ9NWC5 275 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 COA4Q9NYJ1 87 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 RNF7Q9UBF6 113 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 EPHA6Q9UF33 1036 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 KCNG2Q9UJ96 466 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF490Q9ULM2 529 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 RAB26Q9ULW5 256 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 MMP17Q9ULZ9 603 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 UBIAD1Q9Y5Z9 338 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 ALG5Q9Y673 324 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 CLIC4Q9Y696 253 aa4.44□□□□□ -1.7
ECHDC1-204ENST00000368292 OBSL1O75147 1896 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 COL27A1Q8IZC6 1860 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 DENND4CQ5VZ89 1909 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CCDC168Q8NDH2 2452 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 IGHV1OR15-9A0A0B4J2B8 117 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 A0A0G2JK05 382 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 A0A1B0GVI7 797 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TSTD3H0UI37 97 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 K7EQS6 105 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CHEK1O14757 476 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SGCEO43556 437 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SCO2O43819 266 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 KLRC4O43908 158 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SRPX2O60687 465 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 ATP1A1P05023 1023 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CSNK2A2P19784 350 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 OGNP20774 298 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 MPZP25189 248 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 NMBRP28336 390 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CCR7P32248 378 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SSTR5P35346 364 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CSKP41240 450 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PPOXP50336 477 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 VSX2P58304 361 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TAS2R39P59534 338 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 BAMBIQ13145 260 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 POU6F1Q14863 301 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PSG5Q15238 335 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM176BQ3YBM2 270 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 VPS26BQ4G0F5 336 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 GGTA1PQ4G0N0 100 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PDZD11Q5EBL8 140 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PIK3CD-AS1Q5SR53 167 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 WASHC2DQ5SRD0 308 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 HIST2H2BDQ6DRA6 164 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 HIST2H2AA3Q6FI13 130 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 LCTLQ6UWM7 567 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 QSOX2Q6ZRP7 698 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 C19orf35Q6ZS72 473 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 COX15Q7KZN9 410 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 MEPCEQ7L2J0 689 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SSX7Q7RTT5 188 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM144Q7Z5S9 345 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 RNF113BQ8IZP6 322 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 STPG2Q8N412 459 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 FGFRL1Q8N441 504 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM161BQ8NDZ6 487 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 GJC3Q8NFK1 279 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 OR52I2Q8NH67 350 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SSC4DQ8WTU2 575 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SNAPC3Q92966 411 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 SMIM12Q96EX1 92 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 PELI1Q96FA3 418 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF75AQ96N20 296 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 MICU1Q9BPX6 476 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TCEAL7Q9BRU2 100 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 BARHL1Q9BZE3 327 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 UBXN6Q9BZV1 441 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 EBF2Q9HAK2 575 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 CDH20Q9HBT6 801 aa4.43□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM138Q9NPI0 162 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms