RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 ZNF416Q9BWM5 594 aa13.24□□□□□ -0.29
NEK2-201ENST00000366998 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
NEK2-201ENST00000366998 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
NEK2-201ENST00000366998 PTPRZ1P23471 2315 aaPredicted RBP13.24□□□□□ -0.29
NEK2-201ENST00000366998 A0A0B4J203 849 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 RER1O15258 196 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 RAF1P04049 648 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 ELK1P19419 428 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 EVX1P49640 407 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 PMP22Q01453 160 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 C3AR1Q16581 482 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 HES5Q5TA89 166 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 STAC2Q6ZMT1 411 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 LRRC18Q8N456 261 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 POC5Q8NA72 575 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 PRRG4Q9BZD6 226 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 MCTS1Q9ULC4 181 aaKnown RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 NCOA6Q14686 2063 aaPredicted RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 SNRPBP14678 240 aaKnown RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 NTF4P34130 210 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 IL18Q14116 193 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 PLXDC2Q6UX71 529 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 ZNF704Q6ZNC4 412 aaPredicted RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 FOXL2NBQ6ZUU3 175 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 ZNF671Q8TAW3 534 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 COX4I2Q96KJ9 171 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 ALKBH3Q96Q83 286 aaPredicted RBP13.23□□□□□ -0.29
NEK2-201ENST00000366998 GFI1Q99684 422 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 EXTL2Q9UBQ6 330 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 V9GY05 133 aa13.23□□□□□ -0.29
NEK2-201ENST00000366998 TRAV8-7A0A075B6U6 113 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 LOC107986453A0A1B0GWG9 222 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 DCDC2BA2VCK2 349 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 ANXA2P2A6NMY6 339 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 ACTL6AO96019 429 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 MAS1P04201 325 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 EIF4EP06730 217 aaKnown RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 ANXA2P07355 339 aaKnown RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 ACHEP22303 614 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 APEX1P27695 318 aaKnown RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 MMP16P51512 607 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 PRKXP51817 358 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 ENDOGQ14249 297 aaKnown RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 BCL2A1Q16548 175 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 RNFT1Q5M7Z0 435 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 CHMP1BQ7LBR1 199 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 OR5H6Q8NGV6 325 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 NABP1Q96AH0 204 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 ZNF837Q96EG3 531 aaPredicted RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 ZCCHC4Q9H5U6 513 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 CRLF2Q9HC73 371 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 FAM206AQ9NX38 181 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 PAQR5Q9NXK6 330 aaPredicted RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 CLEC4AQ9UMR7 237 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 NOSIPQ9Y314 301 aaKnown RBP13.22□□□□□ -0.29
NEK2-201ENST00000366998 N6AMT1Q9Y5N5 214 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 CELSR3Q9NYQ7 3312 aa13.22□□□□□ -0.29
NEK2-201ENST00000366998 TRGV5A0A0B4J1U4 118 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 P2RY10O00398 339 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 TFECO14948 347 aaPredicted RBP13.21□□□□□ -0.29
NEK2-201ENST00000366998 KLK10O43240 276 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 CD2P06729 351 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 UBCP0CG48 685 aaKnown RBP13.21□□□□□ -0.29
NEK2-201ENST00000366998 DCTDP32321 178 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 TALDO1P37837 337 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 DEFA1P59665 94 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 DEFA3P59666 94 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 PSMA6P60900 246 aaKnown RBP13.21□□□□□ -0.29
NEK2-201ENST00000366998 FOXC1Q12948 553 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 OXA1LQ15070 435 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 TMEM244Q5VVB8 128 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 METAP1DQ6UB28 335 aaPredicted RBP13.21□□□□□ -0.29
NEK2-201ENST00000366998 IGFL2Q6UWQ7 119 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 LRRTM1Q86UE6 522 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 GDPD1Q8N9F7 314 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 PBOV1Q9GZY1 135 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 EMC3Q9P0I2 261 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 KCNMB2Q9Y691 235 aa13.21□□□□□ -0.29
NEK2-201ENST00000366998 IFITM5A6NNB3 132 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 AIPO00170 330 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 KRT33AO76009 404 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 IL7P13232 177 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 ADRA2CP18825 462 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 PSMD7P51665 324 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 MRPS34P82930 218 aaKnown RBP13.21□□□□□ -0.3
NEK2-201ENST00000366998 NHLH1Q02575 133 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 P2RY14Q15391 338 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 BAK1Q16611 211 aa13.21□□□□□ -0.3
NEK2-201ENST00000366998 RSPO4Q2I0M5 234 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms