RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CLDN11O75508 207 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 WBP4O75554 376 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 CCNKO75909 580 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 MPZL1O95297 269 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 APCSP02743 223 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4L2P0CJ85 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4L3P0CJ86 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4L5P0CJ88 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4L6P0CJ89 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4L7P0CJ90 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 WARSP23381 471 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DTYMKP23919 212 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 SLC11A1P49279 550 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 EIF3EP60228 445 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 SHHQ15465 462 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF880Q6PDB4 577 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 NPWQ8N729 165 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR4K5Q8NGD3 323 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 NUBPLQ8TB37 319 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 SLC38A4Q969I6 547 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 NTAN1Q96AB6 310 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 FLYWCH2Q96CP2 140 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 GALNT14Q96FL9 552 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 NARS2Q96I59 477 aaKnown RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 OR10C1Q96KK4 312 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 LINC00477Q96M19 166 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 PANX1Q96RD7 426 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 MICU1Q9BPX6 476 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF2Q9BSG1 426 aaPredicted RBP2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 ING2Q9H160 280 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 RETNQ9HD89 108 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 DUX4Q9UBX2 424 aa2.35□□□□□ -2.03
RNU6-560P-201ENST00000364007 LOXHD1Q8IVV2 1947 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 BAZ2AQ9UIF9 1905 aaKnown RBP2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 TRBV11-1A0A0K0K1C0 115 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 CHST1O43916 411 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 YIF1AO95070 293 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 H6PDO95479 791 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 SERPINE2P07093 398 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 ZNF806P0C7X5 589 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 RRM2P31350 389 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 P2RX1P51575 399 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 CRISP1P54107 249 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 VSX2P58304 361 aaPredicted RBP2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 SP4Q02446 784 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 COX19Q49B96 90 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 CARD17Q5XLA6 110 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 C12orf54Q6X4T0 127 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 CMC1Q7Z7K0 106 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 CALHM1Q8IU99 346 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 RGP1Q92546 391 aaPredicted RBP2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 PLIN2Q99541 437 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 FOXC2Q99958 501 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 DDX19AQ9NUU7 478 aaKnown RBP2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 TRMT112Q9UI30 125 aaKnown RBP2.34□□□□□ -2.03
RNU6-560P-201ENST00000364007 GAKO14976 1311 aa2.34□□□□□ -2.04
RNU6-560P-201ENST00000364007 TRIP11Q15643 1979 aa2.34□□□□□ -2.04
RNU6-560P-201ENST00000364007 PTPRTO14522 1441 aa2.34□□□□□ -2.04
RNU6-560P-201ENST00000364007 YEATS2Q9ULM3 1422 aa2.34□□□□□ -2.04
RNU6-560P-201ENST00000364007 IGLV2-18A0A075B6J9 118 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR6C74A6NCV1 312 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CCDC169A6NNP5 214 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 SERPINE3A8MV23 424 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 H7C417 338 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 RBBP9O75884 186 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 FLOT1O75955 427 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 ARG1P05089 322 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CD5P06127 495 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 ATF6P18850 670 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 RAB3AP20336 220 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 HCAR3P49019 387 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CDKN2DP55273 166 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 RAB10P61026 200 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 LIPEQ05469 1076 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 LRRC74AQ0VAA2 488 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 SF3A2Q15428 464 aaKnown RBP2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 SLC25A34Q6PIV7 304 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 HMGN2P46Q86SG4 172 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 WDFY1Q8IWB7 410 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 NECAP1Q8NC96 275 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR6N1Q8NGY5 312 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 LYPD6BQ8NI32 183 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 L3HYPDHQ96EM0 354 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 RNF5Q99942 180 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 RTBDNQ9BSG5 229 aaPredicted RBP2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 FAM192AQ9GZU8 254 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 OR52D1Q9H346 318 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 BEX1Q9HBH7 125 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 SLC38A10Q9HBR0 1119 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 CCDC59Q9P031 241 aaKnown RBP2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 MTFP1Q9UDX5 166 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 SLC17A4Q9Y2C5 497 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 NINLQ9Y2I6 1382 aa2.33□□□□□ -2.04
RNU6-560P-201ENST00000364007 THADAQ6YHU6 1953 aa2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 AHDC1Q5TGY3 1603 aaPredicted RBP2.32□□□□□ -2.04
RNU6-560P-201ENST00000364007 IGKV1-8A0A0C4DH67 115 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms