RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 NMES1Q9C002 83 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 NIT2Q9NQR4 276 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 SLC22A11Q9NSA0 550 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-201ENST00000361909 WIF1Q9Y5W5 379 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 TDRD6O60522 2096 aaKnown RBP17.14■□□□□ 0.33
CMTM3-201ENST00000361909 NUDT21O43809 227 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 NKX2-2O95096 273 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 CX3CR1P49238 355 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 AFF3P51826 1226 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 EIF2S3LQ2VIR3 472 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 FCRL6Q6DN72 434 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 UNQ6126/PRO20091Q6UXV3 157 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 BIVMQ86UB2 503 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 INTS12Q96CB8 462 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 RASD2Q96D21 266 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 DCBLD2Q96PD2 775 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF587Q96SQ5 575 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 UCK1Q9HA47 277 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 ASH2LQ9UBL3 628 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 LAMP5Q9UJQ1 280 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 SNRNP200O75643 2136 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 A0A087WUJ7 227 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 C9orf170A2RU37 121 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 URADA6NGE7 173 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 BCAT2O15382 392 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 B3GALT2O43825 422 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 MAOAP21397 527 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 FASLGP48023 281 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 DMWDQ09019 674 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 GFOD2Q3B7J2 385 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 EIF5AL1Q6IS14 154 aaKnown RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 SLC16A13Q7RTY0 426 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 ZPLD1Q8TCW7 415 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 PTX4Q96A99 478 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 SEC22AQ96IW7 307 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 SLC41A2Q96JW4 573 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 C4orf45Q96LM5 186 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 WDR76Q9H967 626 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 CHMP1AQ9HD42 196 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 PRMT8Q9NR22 394 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-201ENST00000361909 DAPP1Q9UN19 280 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 KLHDC2Q9Y2U9 406 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 SLC22A7Q9Y694 548 aa17.13■□□□□ 0.33
CMTM3-201ENST00000361909 EFCAB7A8K855 629 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 M0QYG6 137 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 CCSO14618 274 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 ARRB1P49407 418 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 PAPD4Q6PIY7 484 aaKnown RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 VN1R4Q7Z5H5 301 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 WDR5BQ86VZ2 330 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 PAQR4Q8N4S7 273 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 TSEN15Q8WW01 171 aaKnown RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 TMEM41AQ96HV5 264 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 SMIM8Q96KF7 97 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 RHOFQ9HBH0 211 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 IKZF2Q9UKS7 526 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 GON4LQ3T8J9 2241 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 DUS4LO95620 317 aaKnown RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 MT-ND4LP03901 98 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 FAM157CP0CG43 387 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 SMIM10L1P0DMW3 83 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 CD37P11049 281 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 PGAM2P15259 253 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 GABRA3P34903 492 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 TAS2R31P59538 309 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 ADAM8P78325 824 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 EMC4Q5J8M3 183 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-201ENST00000361909 KIRREL2Q6UWL6 708 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 ADGRE4PQ86SQ3 457 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF584Q8IVC4 421 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 LMX1AQ8TE12 382 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 SMIM10Q96HG1 83 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 LYRM4Q9HD34 91 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 VSIG4Q9Y279 399 aa17.12■□□□□ 0.33
CMTM3-201ENST00000361909 METTL21EPA6NDL7 271 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 LMO7DNF2Z398 122 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 MFNGO00587 321 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 TXNDC12O95881 172 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 IGHV2-70P01814 119 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 AGAP20933 346 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 IL13RA1P78552 427 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 SRSF3P84103 164 aaKnown RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 MST1LQ2TV78 715 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 OOSP2Q86WS3 158 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 C17orf82Q86X59 251 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 OR10G6Q8NH81 332 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 DCUN1D4Q92564 292 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 TUBA4BQ9H853 241 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 HRASLS2Q9NWW9 162 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 SPACA6W5XKT8 324 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 A0A087WV48 116 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF705EA8MWA4 302 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-201ENST00000361909 B4DGG1 531 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 HTR3BO95264 441 aa17.11■□□□□ 0.33
CMTM3-201ENST00000361909 FBP1P09467 338 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms