RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 KIR2DS5A0A0G2JLQ3 304 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 A0A0G2JNG1 304 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 PYCARD-AS1I3L0S3 204 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 KIR2DS3K7RE56 304 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 CST2P09228 141 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 PFN3P60673 137 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 HIST1H3AP68431 136 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 KIR2DS5Q14953 304 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC48A1Q6P1K1 146 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 MED25Q71SY5 747 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 VRK3Q8IV63 474 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC38A9Q8NBW4 561 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 NXF2Q9GZY0 626 aaKnown RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 CSNK1G1Q9HCP0 422 aa12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 DNMT3BQ9UBC3 853 aaKnown RBP12.27□□□□□ -0.45
CCDC144A-203ENST00000360495 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 IL5P05113 134 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 PPP1CBP62140 327 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 EEF1A2Q05639 463 aaKnown RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 PJVKQ0ZLH3 352 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 NR0B2Q15466 257 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 HNRNPA1L2Q32P51 320 aaKnown RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 MIDNQ504T8 468 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC22A12Q96S37 553 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 A0A087X0M5 115 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SERTM2A0A1B0GWG4 89 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 A0A1B0GX30 115 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 XRCC2O43543 280 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 ZFAND5O76080 213 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 TBPP20226 339 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 ETFDHQ16134 617 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 OR2A2Q6IF42 318 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 Q6ZSR6 202 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SYS1Q8N2H4 156 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 ARSGQ96EG1 525 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 LRIT1Q9P2V4 623 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 USP3Q9Y6I4 520 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 M0R143 59 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 EFSO43281 561 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CIDEAO60543 219 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 Q3ZCU0 254 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 AFMIDQ63HM1 303 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 DOK3Q7L591 496 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CAPNS2Q96L46 248 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SRPK3Q9UPE1 567 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 TMEM184BQ9Y519 407 aaPredicted RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 MEIKINA0A087WXM9 373 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 HCRTR1O43613 425 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CSF2RAP15509 400 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 COX5AP20674 150 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 EPHA2P29317 976 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 NOVA1P51513 510 aaKnown RBP12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 ARG2P78540 354 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CDK5R1Q15078 307 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC25A35Q3KQZ1 300 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 STAC2Q6ZMT1 411 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 SYT13Q7L8C5 426 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 OR2AE1Q8NHA4 323 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CA5BP1Q8WTZ4 195 aa12.26□□□□□ -0.45
CCDC144A-203ENST00000360495 CT45A10P0DMU9 189 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 HIST1H1CP16403 213 aaKnown RBP12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 FOLR3P41439 243 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC35A1P78382 337 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 TFAP2EQ6VUC0 442 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 OR2G2Q8NGZ5 317 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 SFXN1Q9H9B4 322 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PRSS38A1L453 326 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 ABHD16AO95870 558 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 CEBPEQ15744 281 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PDXPQ96GD0 296 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 CCNL2Q96S94 520 aaPredicted RBP12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 WSB2Q9NYS7 404 aaPredicted RBP12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 HSFX1Q9UBD0 423 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 XKRY2A2RUG3 117 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PRAMEF25A6NGN4 478 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 CTBSQ01459 385 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PRAMEF5Q5TYX0 476 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PRAMEF6Q5VXH4 476 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 MISPQ8IVT2 679 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 OR14A16Q8NHC5 309 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 SLC25A19Q9HC21 320 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 OR5V1Q9UGF6 321 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 B3GALT4O96024 378 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 RRASP10301 218 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 IAPPP10997 89 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 EPXP11678 715 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 CCKARP32238 428 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 FCRL6Q6DN72 434 aa12.25□□□□□ -0.45
CCDC144A-203ENST00000360495 PPP1R3BQ86XI6 285 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms