RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 VAMP1P23763 118 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 LAP3P28838 519 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 HTR5AP47898 357 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 HGFACQ04756 655 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 DHRS11Q6UWP2 260 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 CDC20BQ86Y33 519 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 OR51A4Q8NGJ6 313 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 CASTOR1Q8WTX7 329 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 GAL3ST3Q96A11 431 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 ARSGQ96EG1 525 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 COX14Q96I36 57 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 KIRREL1Q96J84 757 aa13.44□□□□□ -0.26
UBAP1-202ENST00000359544 C13orf42A0A1B0GVH6 325 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 CSN2P05814 226 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 CD80P33681 288 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 PRPS1P60891 318 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 EGR3Q06889 387 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 TRMT12Q53H54 448 aaKnown RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 KRBOX4Q5JUW0 171 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 PHF19Q5T6S3 580 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 ZSCAN4Q8NAM6 433 aaPredicted RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 NUBPLQ8TB37 319 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 TOLLIPQ9H0E2 274 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 C8orf33Q9H7E9 229 aaPredicted RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 FAM86C1Q9NVL1 165 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 CACNA1IQ9P0X4 2223 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 MED6O75586 246 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 FCGR3AP08637 254 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 FBXO45P0C2W1 286 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 SERPINF1P36955 418 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 PMPCAQ10713 525 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 C2orf27AQ580R0 203 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 FHL5Q5TD97 284 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 ZNF614Q8N883 585 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 LMF1Q96S06 567 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 GPX7Q96SL4 187 aaPredicted RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 WDR77Q9BQA1 342 aaPredicted RBP13.43□□□□□ -0.26
UBAP1-202ENST00000359544 RNF126Q9BV68 326 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 ADAM19Q9H013 955 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 TM7SF3Q9NS93 570 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 KLK13Q9UKR3 277 aa13.43□□□□□ -0.26
UBAP1-202ENST00000359544 A6NLC8 198 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 DBX1A6NMT0 343 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 PPIHO43447 177 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ADRB3P13945 408 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 CPMP14384 443 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ACKR3P25106 362 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 TLX1P31314 330 aaPredicted RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ACAA2P42765 397 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 TAS2R31P59538 309 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 KCNAB1Q14722 419 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 NUMA1Q14980 2115 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 C9orf152Q5JTZ5 239 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ADAMTSL4Q6UY14 1074 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 RAB3CQ96E17 227 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 RRNAD1Q96FB5 475 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 C4orf45Q96LM5 186 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ULBP3Q9BZM4 244 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 TMEM14AQ9Y6G1 99 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 A0A087WV62 115 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 FAM157AC9JC47 383 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 STK17BO94768 372 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 KLK3P07288 261 aaPredicted RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 HTR2CP28335 458 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 CCKBRP32239 447 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 CCINQ13939 588 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ETV3LQ6ZN32 361 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ERN2Q76MJ5 926 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ZNF550Q7Z398 422 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ADGRE4PQ86SQ3 457 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 CD163Q86VB7 1156 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 OR2L3Q8NG85 312 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 AKR1E2Q96JD6 320 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 AQP10Q96PS8 301 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 ELF4Q99607 663 aaPredicted RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 CHRDQ9H2X0 955 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 PARP11Q9NR21 331 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
UBAP1-202ENST00000359544 TMED7Q9Y3B3 224 aa13.42□□□□□ -0.26
UBAP1-202ENST00000359544 POM121BA6NF01 834 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 ADH1CP00326 375 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 IFNA17P01571 189 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 LYL1P12980 280 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 CDKN2AP42771 156 aaKnown RBP13.41□□□□□ -0.26
UBAP1-202ENST00000359544 LPAR6P43657 344 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 METAP1P53582 386 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 ODF4Q2M2E3 257 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 AWAT1Q58HT5 328 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 PRSS54Q6PEW0 395 aa13.41□□□□□ -0.26
UBAP1-202ENST00000359544 OR4N5Q8IXE1 308 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms