RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 DPTQ07507 201 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 IL34Q6ZMJ4 242 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 CYHR1Q6ZMK1 362 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 ST8SIA2Q92186 375 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 RNF150Q9ULK6 438 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 RGPD1P0DJD0 1748 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 DEGS1O15121 323 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 GSTP1P09211 210 aaKnown RBP13.54□□□□□ -0.24
CHD4-201ENST00000357008 NRSN2Q9GZP1 204 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
CHD4-201ENST00000357008 RNF212Q495C1 297 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 TEX261Q6UWH6 196 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 RHNO1Q9BSD3 238 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 ZBP1Q9H171 429 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 PISDQ9UG56 409 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 HS3ST3A1Q9Y663 406 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 U3KQ87 197 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 G3V3Y1 287 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 K7ESM1 405 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 CPN1P15169 458 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 CD1CP29017 333 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 IRS1P35568 1242 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 HAGHQ16775 308 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 PRTGQ2VWP7 1150 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 PDZD11Q5EBL8 140 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 RPUSD3Q6P087 351 aaKnown RBP13.54□□□□□ -0.24
CHD4-201ENST00000357008 USP51Q70EK9 711 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 H2BFWTQ7Z2G1 175 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 OR8U1Q8NH10 309 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 TRAV1-2A0A0B4J238 106 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 CD22P20273 847 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 MMP15P51511 669 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 ZNF561Q8N587 486 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 BCORP1Q8N888 145 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 ZNF768Q9H5H4 540 aaKnown RBP13.54□□□□□ -0.24
CHD4-201ENST00000357008 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 C4orf47A7E2U8 309 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 CD37P11049 281 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 SPNP16150 400 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 GPR85P60893 370 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 HTRA4P83105 476 aaPredicted RBP13.53□□□□□ -0.24
CHD4-201ENST00000357008 CMTM2Q8TAZ6 248 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 TSLPQ969D9 159 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 AUNIPQ9H7T9 357 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 NDRG3Q9UGV2 375 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 A0A0B4J203 849 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 A0A1B0GX78 115 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 ENSAO43768 121 aaKnown RBP13.53□□□□□ -0.24
CHD4-201ENST00000357008 LYG2Q86SG7 212 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 SUCNR1Q9BXA5 334 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 GPR173Q9NS66 373 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 NUP98P52948 1817 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 TO15178 435 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 ALOX12BO75342 701 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 VAMP5O95183 116 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 EPXP11678 715 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 EDN3P14138 238 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 OR2B8PP59922 312 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 DCAF12Q5T6F0 453 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 C2orf50Q96LR7 162 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 SLIRPQ9GZT3 109 aaKnown RBP13.53□□□□□ -0.24
CHD4-201ENST00000357008 CYTIPO60759 359 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 GLCCI1Q86VQ1 547 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 GALNT16Q8N428 558 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 TRAF3IP2O43734 574 aaPredicted RBP13.53□□□□□ -0.24
CHD4-201ENST00000357008 FGF17O60258 216 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 GLAP06280 429 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 BSGP35613 385 aa13.53□□□□□ -0.24
CHD4-201ENST00000357008 ENDOGQ14249 297 aaKnown RBP13.53□□□□□ -0.24
CHD4-201ENST00000357008 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
CHD4-201ENST00000357008 DCTDP32321 178 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 LPAL2Q16609 132 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 C12orf57Q99622 126 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 JAM3Q9BX67 310 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 LAT2Q9GZY6 243 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 BCL2L11O43521 198 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 XRCC3O43542 346 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.24
CHD4-201ENST00000357008 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.24
CHD4-201ENST00000357008 PYCR3Q53H96 274 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 FGF22Q9HCT0 170 aa13.52□□□□□ -0.24
CHD4-201ENST00000357008 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.24
CHD4-201ENST00000357008 RYDENQ9NUL5 291 aaKnown RBP13.52□□□□□ -0.24
CHD4-201ENST00000357008 SCO1O75880 301 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 TGM1P22735 817 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 H3F3AP84243 136 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 CLLU1Q5K131 121 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 ANGPTL6Q8NI99 470 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 NUDCD2Q8WVJ2 157 aa13.52□□□□□ -0.25
CHD4-201ENST00000357008 ISG20L2Q9H9L3 353 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms