RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ABHD6Q9BV23 337 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLC17A5Q9NRA2 495 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLCO1C1Q9NYB5 712 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ERVK-18Q9QC07 812 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 KLHL21Q9UJP4 597 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 POU2F3Q9UKI9 436 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 GTF2A1LQ9UNN4 478 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 BAIAP2Q9UQB8 552 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SIRT4Q9Y6E7 314 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 MYO9AB2RTY4 2548 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ACANP16112 2415 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 H3BSH0 61 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 IGKV3-15P01624 115 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SPARCP09486 303 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR8G3PP0DMU2 310 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 CRHBPP24387 322 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 EEF1B2P24534 225 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 CRABP1P29762 137 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ASCL1P50553 236 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ZNF84P51523 738 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR12D2P58182 307 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 KRTAP10-9P60411 292 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 HIST1H3AP68431 136 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ST3GAL4Q11206 333 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 KCNMB1Q16558 191 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 HIST2H3PS2Q5TEC6 136 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 LRRN1Q6UXK5 716 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 HIST2H3AQ71DI3 136 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLC16A14Q7RTX9 510 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 CDC20BQ86Y33 519 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR6N2Q8NGY6 317 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SSC4DQ8WTU2 575 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 NRGNQ92686 78 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 RNASE6Q93091 150 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 RADILQ96JH8 1075 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SNX18Q96RF0 628 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR51B6Q9H340 312 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 PIGMQ9H3S5 423 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 LIME1Q9H400 295 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 POFUT1Q9H488 388 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 Q9H521 79 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 PSORS1C1Q9UIG5 152 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 GDF2Q9UK05 429 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 RAB26Q9ULW5 256 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 GRIP1Q9Y3R0 1128 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SNTNA6NMZ2 147 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 DEFB108AA8MXU0 73 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 CENPBD1B2RD01 187 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLC1A7O00341 560 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SYNGR3O43761 229 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 CNOT4O95628 575 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 CECR9P0C854 216 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ZNF823P16415 610 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 MSR1P21757 451 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 WNT5AP41221 380 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 IDH3GP51553 393 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLC35A2P78381 396 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 GALK2Q01415 458 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 AHSA2Q719I0 299 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 VASH1Q7L8A9 365 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 WFDC8Q8IUA0 241 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 DMRTC2Q8IXT2 367 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 ZNF295-AS1Q8N0V1 137 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ZNF485Q8NCK3 441 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OTOSQ8NHW6 89 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 THEM6Q8WUY1 208 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ASB5Q8WWX0 329 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 BOD1Q96IK1 185 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR2H1Q9GZK4 316 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 DUSP21Q9H596 190 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 FKBP14Q9NWM8 211 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 HAO2Q9NYQ3 351 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 NDRG3Q9UGV2 375 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 MRM2Q9UI43 246 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 ARID1AO14497 2285 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 C12orf71A8MTZ7 269 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 TMCC2O75069 709 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 MAP2K4P45985 399 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 NANOS3P60323 173 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 GGTLC2Q14390 218 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SLC25A35Q3KQZ1 300 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ALKBH6Q3KRA9 238 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 TIMM23BQ5SRD1 257 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 FAM205BPQ63HN1 556 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 SP5Q6BEB4 398 aaPredicted RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 DNM1P34Q6PK57 102 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 PRSS45Q7RTY3 260 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 RDH10Q8IZV5 341 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 ZNF786Q8N393 782 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR2AJ1Q8NGZ0 328 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 POM121L2Q96KW2 1035 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 OR5M11Q96RB7 305 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 TSC22D3Q99576 134 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 YIPF3Q9GZM5 350 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 CCDC90BQ9GZT6 254 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 MOKQ9UQ07 419 aa3.49□□□□□ -1.85
LIG4-201ENST00000356922 EXOGQ9Y2C4 368 aaKnown RBP3.49□□□□□ -1.85
LIG4-201ENST00000356922 HIVEP1P15822 2718 aa3.48□□□□□ -1.85
LIG4-201ENST00000356922 TUBAL3A6NHL2 446 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms