RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SOCS7O14512 581 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 ELK1P19419 428 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 SUMO1P63165 101 aaKnown RBP15.82■□□□□ 0.12
COL27A1-201ENST00000356083 CPZQ66K79 652 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL27A1-201ENST00000356083 OR51I2Q9H344 312 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 PRSS21Q9Y6M0 314 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 PTTG1O95997 202 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 EIF1P41567 113 aaKnown RBP15.82■□□□□ 0.12
COL27A1-201ENST00000356083 GLIPR1L1Q6UWM5 242 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 DHRS11Q6UWP2 260 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM40Q8WWA1 233 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF583Q96ND8 569 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 A0A1W2PNR3 127 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 PPP3CBP16298 524 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 SHC1P29353 583 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 SFTPA2Q8IWL1 248 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 SFTPA1Q8IWL2 248 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 OR5M11Q96RB7 305 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 H3BVH4 76 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 SELEP16581 610 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 RAB38P57729 211 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 SRPXP78539 464 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 NOTCH3Q9UM47 2321 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 SPINK4O60575 86 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 INSM2Q96T92 566 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF701M0R085 212 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-201ENST00000356083 TAS2R45P59539 299 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 DPPA4Q7L190 304 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 MRPL10Q7Z7H8 261 aaKnown RBP15.81■□□□□ 0.12
COL27A1-201ENST00000356083 PIANPQ8IYJ0 282 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ERGIC1Q969X5 290 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 DPH3P1Q9H4G8 78 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 AK3Q9UIJ7 227 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 HSPE1-MOB4S4R3N1 261 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ACOT8O14734 319 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 QDPRP09417 244 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 CCR6P51684 374 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 PFN4Q8NHR9 129 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 SMIM14Q96QK8 99 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ANKUB1A6NFN9 424 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF623O75123 536 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 TBXA2RP21731 343 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ADAM5Q6NVV9 412 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 PLPP6Q8IY26 295 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 GABRG1Q8N1C3 465 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 OR2AE1Q8NHA4 323 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 UBTD1Q9HAC8 227 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 TRAV36DV7A0A075B6V5 113 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 A0A0B4J203 849 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ADGRB1O14514 1584 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 SLC25A4P12235 298 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF511Q8NB15 262 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF391Q9UJN7 358 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 DNAJB5O75953 348 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 OR5H8P0DN80 308 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 DUSP1P28562 367 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 KCNG2Q9UJ96 466 aa15.81■□□□□ 0.12
COL27A1-201ENST00000356083 AREGP15514 252 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ADRA1AP35348 466 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 PRDX1Q06830 199 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 LRRC10Q5BKY1 277 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 GLCCI1Q86VQ1 547 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 DHRS4Q9BTZ2 278 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 UCK1Q9HA47 277 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 OR2F2O95006 317 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 RPS19BP1Q86WX3 136 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 LURAP1Q96LR2 239 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 CASP8AP2Q9UKL3 1982 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 NKAIN1Q4KMZ8 207 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 PM20D1Q6GTS8 502 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 CCL17Q92583 94 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ISL2Q96A47 359 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 DCAF13Q9NV06 445 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 SLCO1B1Q9Y6L6 691 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ABCA7Q8IZY2 2146 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 PLRG1O43660 514 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 CNMDO75829 334 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ZDHHC11BP0C7U3 371 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ERVFC1P60507 584 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 NPY5RQ15761 445 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF260Q3ZCT1 412 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 OTPQ5XKR4 325 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 SLC35E4Q6ICL7 350 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 WBP2Q969T9 261 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 NKX2-1P43699 371 aaPredicted RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 MAP2K6P52564 334 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 CDK5Q00535 292 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 BAMBIQ13145 260 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 EXOSC3Q9NQT5 275 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 SLIT2O94813 1529 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 J3QR89 54 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 GPR171O14626 319 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 FABP7O15540 132 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 XRCC2O43543 280 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 OR5M8Q8NGP6 311 aa15.8■□□□□ 0.12
COL27A1-201ENST00000356083 RPL3LQ92901 407 aaKnown RBP15.8■□□□□ 0.12
COL27A1-201ENST00000356083 L3HYPDHQ96EM0 354 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms