RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 BCAP31P51572 246 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 SOX8P57073 446 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 GDPD3Q7L5L3 318 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 DTX3Q8N9I9 347 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 OR4M2Q8NGB6 313 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 ULBP2Q9BZM5 246 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 FAM206AQ9NX38 181 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 LINC00854A0A1B0GVQ3 168 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 KLRC4-KLRK1H3BQV0 150 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 RER1O15258 196 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 SLC43A1O75387 559 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 SPNP16150 400 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 ARG2P78540 354 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 SGCAQ16586 387 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 PDSS1Q5T2R2 415 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 BCL2L15Q5TBC7 163 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 DNAAF1Q8NEP3 725 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 ASB5Q8WWX0 329 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.72■■□□□ 1.232e-6■■□□□ 13.2
CLK2-201ENST00000355560 SLC6A15Q9H2J7 730 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 NELFAQ9H3P2 528 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 ANXA2P2A6NMY6 339 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 SSX4O60224 188 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 ANXA2P07355 339 aaKnown RBP22.72■■□□□ 1.23
CLK2-201ENST00000355560 CD46P15529 392 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 MSR1P21757 451 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 DCTDP32321 178 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 LHX2P50458 406 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 C20orf196Q8IYI0 205 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 INTS12Q96CB8 462 aaKnown RBP22.72■■□□□ 1.23
CLK2-201ENST00000355560 ZNF416Q9BWM5 594 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 RBM24Q9BX46 236 aaKnown RBP22.72■■□□□ 1.23
CLK2-201ENST00000355560 LIN7BQ9HAP6 207 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 RHBDL2Q9NX52 303 aa22.72■■□□□ 1.23
CLK2-201ENST00000355560 ARPC4-TTLL3A0A0A6YYG9 625 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 LOC107986453A0A1B0GWG9 222 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 CDK2AP1O14519 115 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 DHHO43323 396 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 TRIQKQ629K1 86 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 SNRNP27Q8WVK2 155 aaKnown RBP22.71■■□□□ 1.23
CLK2-201ENST00000355560 ZNF552Q9H707 407 aaPredicted RBP22.71■■□□□ 1.23
CLK2-201ENST00000355560 HHLA2Q9UM44 414 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 RCE1Q9Y256 329 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 GVINP1Q7Z2Y8 2422 aa22.71■■□□□ 1.23
CLK2-201ENST00000355560 GLSO94925 669 aaPredicted RBP22.7■■□□□ 1.23
CLK2-201ENST00000355560 ISG15P05161 165 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 CD2P06729 351 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 WT1P19544 449 aaPredicted RBP22.7■■□□□ 1.23
CLK2-201ENST00000355560 HSD11B1P28845 292 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 CLDN12P56749 244 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 LSM6P62312 80 aaKnown RBP22.7■■□□□ 1.23
CLK2-201ENST00000355560 SRYQ05066 204 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 ZNF704Q6ZNC4 412 aaPredicted RBP22.7■■□□□ 1.23
CLK2-201ENST00000355560 FCRLAQ7L513 359 aa22.7■■□□□ 1.23
CLK2-201ENST00000355560 UBCP0CG48 685 aaKnown RBP22.7■■□□□ 1.22
CLK2-201ENST00000355560 ACHEP22303 614 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 NTF4P34130 210 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 PITPNBP48739 271 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 FOXL2NBQ6ZUU3 175 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 RHOUQ7L0Q8 258 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 ABHD3Q8WU67 409 aa22.7■■□□□ 1.22
CLK2-201ENST00000355560 PNRC2Q9NPJ4 139 aaKnown RBP22.7■■□□□ 1.22
CLK2-201ENST00000355560 TMEM127O75204 238 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 CLDN18P56856 261 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 TAF13Q15543 124 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 C11orf91Q3C1V1 193 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 CCBE1Q6UXH8 406 aaPredicted RBP22.69■■□□□ 1.22
CLK2-201ENST00000355560 HAS2Q92819 552 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 NABP1Q96AH0 204 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 KCNJ15Q99712 375 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 DLL3Q9NYJ7 618 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 CYTIPO60759 359 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 PSMA6P60900 246 aaKnown RBP22.69■■□□□ 1.22
CLK2-201ENST00000355560 ASAH1Q13510 395 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 UBE2NLQ5JXB2 153 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 TMEM244Q5VVB8 128 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 ASPHD2Q6ICH7 369 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 NRARPQ7Z6K4 114 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 OR13C3Q8NGS6 347 aa22.69■■□□□ 1.22
CLK2-201ENST00000355560 PCDHGA9Q9Y5G4 932 aaKnown RBP22.69■■□□□ 1.22
CLK2-201ENST00000355560 NCOA6Q14686 2063 aaPredicted RBP22.68■■□□□ 1.22
CLK2-201ENST00000355560 HLA-DQB1P01920 261 aa22.68■■□□□ 1.22
CLK2-201ENST00000355560 ZNF84P51523 738 aa22.68■■□□□ 1.22
CLK2-201ENST00000355560 PPIAP62937 165 aaKnown RBP22.68■■□□□ 1.22
CLK2-201ENST00000355560 HYAL4Q2M3T9 481 aa22.68■■□□□ 1.22
CLK2-201ENST00000355560 AAED1Q7RTV5 226 aa22.68■■□□□ 1.22
CLK2-201ENST00000355560 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.68■■□□□ 1.22
CLK2-201ENST00000355560 ZFP62Q8NB50 900 aaPredicted RBP22.68■■□□□ 1.22
CLK2-201ENST00000355560 ZNF837Q96EG3 531 aaPredicted RBP22.68■■□□□ 1.22
CLK2-201ENST00000355560 PBOV1Q9GZY1 135 aa22.68■■□□□ 1.22
CLK2-201ENST00000355560 ZNF407Q9C0G0 2248 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 P2RY10O00398 339 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 TTRP02766 147 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 ZNF708P17019 499 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 ZNF766Q5HY98 468 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 C19orf18Q8NEA5 215 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 WACQ9BTA9 647 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 NIPAL2Q9H841 368 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 CKLFQ9UBR5 152 aa22.67■■□□□ 1.22
CLK2-201ENST00000355560 CCL11P51671 97 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms