RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PRSS23O95084 383 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 AKR7A3O95154 331 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 HTR3BO95264 441 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 IFNA7P01567 189 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 GNAO1P09471 354 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 UROSP10746 265 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 FPR2P25090 351 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 FKBP2P26885 142 aaKnown RBP9.61□□□□□ -0.87
RTN3-204ENST00000354497 SLC15A1P46059 708 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 IDH2P48735 452 aaKnown RBP9.61□□□□□ -0.87
RTN3-204ENST00000354497 SELENOPP49908 381 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 H3F3AP84243 136 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 ZP4Q12836 540 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 SLC9B1Q4ZJI4 515 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 AVPI1Q5T686 147 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 GPR139Q6DWJ6 353 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 ACSM5Q6NUN0 579 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 C8orf82Q6P1X6 216 aaPredicted RBP9.61□□□□□ -0.87
RTN3-204ENST00000354497 NIPAL3Q6P499 406 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 C16orf62Q7Z3J2 963 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 MAVSQ7Z434 540 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 LHFPL3Q86UP9 236 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 CBR4Q8N4T8 237 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 TMEM99Q8N816 258 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 FBLIM1Q8WUP2 373 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 OR5P2Q8WZ92 322 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 RBPMSQ93062 196 aaKnown RBP9.61□□□□□ -0.87
RTN3-204ENST00000354497 MTERF3Q96E29 417 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 TMPRSS13Q9BYE2 586 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 MRPL37Q9BZE1 423 aaKnown RBP9.61□□□□□ -0.87
RTN3-204ENST00000354497 NUAK2Q9H093 628 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 WNT5BQ9H1J7 359 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 ZNF665Q9H7R5 613 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 TNFRSF12AQ9NP84 129 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 G6PC2Q9NQR9 355 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 BIN3Q9NQY0 253 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 POLE4Q9NR33 117 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 OXSMQ9NWU1 459 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 LAMP5Q9UJQ1 280 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 CCL27Q9Y4X3 112 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 PRKDCP78527 4128 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 RPS10-NUDT3A0A1W2PQS6 291 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 LINC00587B1AMM8 73 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 SCAMP2O15127 329 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 PLPP2O43688 288 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 GLRA3O75311 464 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 FABP1P07148 127 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 LINC00032P0C843 101 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 ADORA3P0DMS8 318 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 LAMP1P11279 417 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 HOXB6P17509 224 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 CBLP22681 906 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 PRPH2P23942 346 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 GP2P55259 537 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 PSME3P61289 254 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 LMO4P61968 165 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 ASAH1Q13510 395 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 MAD2L1BPQ15013 274 aaPredicted RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 OR7A5Q15622 319 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 MAPK11Q15759 364 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 MAPK14Q16539 360 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 C3orf36Q3SXR2 165 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 RFTN2Q52LD8 501 aaPredicted RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 ARMCX4Q5H9R4 360 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 DCAF12L2Q5VW00 463 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 KANK2Q63ZY3 851 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 REP15Q6BDI9 236 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 LCN8Q6JVE9 175 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 PAQR6Q6TCH4 344 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 TEX261Q6UWH6 196 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 CCDC190Q86UF4 302 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 EPHX4Q8IUS5 362 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 ZIC4Q8N9L1 334 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 OR2T11Q8NH01 316 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 SFXN5Q8TD22 340 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 GTF3AQ92664 365 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 TUBGCP3Q96CW5 907 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 OR51M1Q9H341 326 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 MS4A5Q9H3V2 200 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 NOX3Q9HBY0 568 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 MED29Q9NX70 200 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 WARS2Q9UGM6 360 aaKnown RBP9.6□□□□□ -0.87
RTN3-204ENST00000354497 ZDHHC2Q9UIJ5 367 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 SLC35A3Q9Y2D2 325 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 U3KQ87 197 aa9.6□□□□□ -0.87
RTN3-204ENST00000354497 ZC3H12DA2A288 527 aaKnown RBP9.59□□□□□ -0.87
RTN3-204ENST00000354497 CCDC182A6NF36 153 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 AP3D1O14617 1153 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 RGS5O15539 181 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 UPK3AO75631 287 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 IGKV3-15P01624 115 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 BCKDHAP12694 445 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 ZNF250P15622 560 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 CBR1P16152 277 aa9.59□□□□□ -0.87
RTN3-204ENST00000354497 POLR2HP52434 150 aaKnown RBP9.59□□□□□ -0.87
RTN3-204ENST00000354497 TMEM33P57088 247 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms