RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 MMP15P51511 669 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CLDN20P56880 219 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 SOX8P57073 446 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 LSM6P62312 80 aaKnown RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HIST1H3AP68431 136 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TAB1Q15750 504 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 RSPO4Q2I0M5 234 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HYAL4Q2M3T9 481 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 UBE2NLQ5JXB2 153 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 PHYHD1Q5SRE7 291 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HES5Q5TA89 166 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HIST2H3PS2Q5TEC6 136 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ABHD17BQ5VST6 288 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 SPINK14Q6IE38 97 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CORO6Q6QEF8 472 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 IGF2-ASQ6U949 168 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF704Q6ZNC4 412 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HIST2H3AQ71DI3 136 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 GPAT4Q86UL3 456 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TMPRSS12Q86WS5 348 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 LYPD6Q86Y78 171 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 C20orf196Q8IYI0 205 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 UBQLNLQ8IYU4 475 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ELMOD2Q8IZ81 293 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CMTM4Q8IZR5 234 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CELF2-AS1Q8N7Q2 184 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 MDS2Q8NDY4 140 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 DUSP18Q8NEJ0 188 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 DEFB124Q8NES8 71 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 OR2M7Q8NG81 312 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 OR10H5Q8NGA6 315 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 OR2V1Q8NHB1 315 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 LGALS14Q8TCE9 139 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ASB5Q8WWX0 329 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TMEM106AQ96A25 262 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 FER1L6-AS2Q96M78 137 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF385AQ96PM9 386 aaKnown RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 NIPAL2Q9H841 368 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 BRD7Q9NPI1 651 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 RBFOX1Q9NWB1 397 aaKnown RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 NPAP1Q9NZP6 1156 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 LRFN1Q9P244 771 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ABI3Q9P2A4 366 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 OR5V1Q9UGF6 321 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TEKT2Q9UIF3 430 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 GDF2Q9UK05 429 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 OR52A1Q9UKL2 312 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HHLA2Q9UM44 414 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 BOKQ9UMX3 212 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 FOXJ3Q9UPW0 622 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 RCE1Q9Y256 329 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ETV7Q9Y603 341 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 SPAARA0A1B0GVQ0 90 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 TMEM269A0A1B0GVZ9 245 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 A0A1W2PPL8 197 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF716A6NP11 495 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 H0YC42 278 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 DHHO43323 396 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 LYRM1O43325 122 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 SULT1B1O43704 296 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 LANCL1O43813 399 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 GLSO94925 669 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 WDPCPO95876 746 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 TTRP02766 147 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 HNRNPCP07910 306 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 H2BFMP0C1H6 154 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 FTH1P19P0C7X4 201 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CDAP32320 146 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CASRP41180 1078 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 KIR2DL3P43628 341 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CSNK1A1P48729 337 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CARD18P57730 90 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 GABREP78334 506 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 PITPNAQ00169 270 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 OC90Q02509 493 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 MADCAM1Q13477 382 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ENDOGQ14249 297 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 OR1C1Q15619 314 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 SLC36A2Q495M3 483 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 WIPI1Q5MNZ9 446 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 TMEM244Q5VVB8 128 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 AGAP6Q5VW22 663 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CARD17Q5XLA6 110 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 TRIQKQ629K1 86 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 DNM1P46Q6ZS02 220 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 FCRLAQ7L513 359 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ALPK2Q86TB3 2170 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF433Q8N7K0 673 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 C19orf18Q8NEA5 215 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 OR14L1PQ8NHC6 308 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF671Q8TAW3 534 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 RAB40AQ8WXH6 277 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 YIPF5Q969M3 257 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 RFT1Q96AA3 541 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms