RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TMEM269A0A1B0GVZ9 245 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF736B4DX44 427 aaPredicted RBP16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 MS4A18H0YCH9 400 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 SRSF10O75494 262 aaKnown RBP16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 CYB5AP00167 134 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 CALCRP30988 508 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 ACTBP60709 375 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 ACTG1P63261 375 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 GLO1Q04760 184 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 UBXN2BQ14CS0 331 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 TAF13Q15543 124 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 MS4A18Q3C1V0 323 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 C3orf33Q6P1S2 294 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 NUP54Q7Z3B4 507 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC51BQ86UW2 128 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 BVESQ8NE79 360 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 FGGYQ96C11 551 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 VN1R1Q9GZP7 353 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 OR52A1Q9UKL2 312 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 VSIG4Q9Y279 399 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 RFPL4AA6NLU0 287 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 RFPL4AL1F8VTS6 287 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 H3BUI4 141 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 EIF4E2O60573 245 aaKnown RBP16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 MT-ATP6P00846 226 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 DMRTC1Q5HYR2 192 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 PDZD9Q8IXQ8 264 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 FOXQ1Q9C009 403 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 PTGES2Q9H7Z7 377 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 CNTD2Q9H8S5 307 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 HHLA2Q9UM44 414 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 MMACHCQ9Y4U1 282 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 OR5H14A6NHG9 310 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 FADS1O60427 444 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 FGF2P09038 288 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 OR7A5Q15622 319 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 MRGPRFQ96AM1 343 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF75AQ96N20 296 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 SPACA5Q96QH8 159 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 ALX4Q9H161 411 aaPredicted RBP16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 TMEM185BQ9H7F4 350 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 CTSFQ9UBX1 484 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 VDAC3Q9Y277 283 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 HRH3Q9Y5N1 445 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 R4GMQ9 66 aa16.18■□□□□ 0.18
PTP4A3-202ENST00000349124 LILRA5A6NI73 299 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 ADAM10O14672 748 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 LDLRAD4O15165 306 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 AHSA1O95433 338 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 PMS2P2O95744 297 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 CXADRP78310 365 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 CDNFQ49AH0 187 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 RHOUQ7L0Q8 258 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 CHST4Q8NCG5 386 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC26A10Q8NG04 563 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 OR6K3Q8NGY3 331 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 NUDCD2Q8WVJ2 157 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 DPYSL5Q9BPU6 564 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 NUDT22Q9BRQ3 303 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 POTEKPQ9BYX7 375 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC17A5Q9NRA2 495 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 HSPB2A8KAH6 182 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 AVPR2P30518 371 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 MPPED2Q15777 294 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 HSPB2Q16082 182 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 ARSKQ6UWY0 536 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 ADGRE4PQ86SQ3 457 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 GKN2Q86XP6 184 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 NAXDQ8IW45 347 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 PAQR4Q8N4S7 273 aaPredicted RBP16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 OR52N4Q8NGI2 321 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 ST7LQ8TDW4 575 aa16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 NOP16Q9Y3C1 178 aaKnown RBP16.17■□□□□ 0.18
PTP4A3-202ENST00000349124 RHPN2P1A8MT19 583 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 FAM25EA8MYX2 175 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 HPP00738 406 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 IGLV3-19P01714 112 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 HLA-AP01891 365 aaKnown RBP16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 RPA2P15927 270 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF823P16415 610 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 ARL4DP49703 201 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 FBXW4P57775 412 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC26A5P58743 744 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 CFAP77Q6ZQR2 320 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 GRINAQ7Z429 371 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 FJX1Q86VR8 437 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 OR1N1Q8NGS0 311 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 C12orf4Q9NQ89 552 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 GDF2Q9UK05 429 aaPredicted RBP16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 PRELID1Q9Y255 219 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC5A6Q9Y289 635 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 PLEKHA6Q9Y2H5 1048 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SPAG17Q6Q759 2223 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 IGHV1OR15-9A0A0B4J2B8 117 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 FTCDNL1E5RQL4 147 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 CD38P28907 300 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 GNALP38405 381 aa16.16■□□□□ 0.18
PTP4A3-202ENST00000349124 SLC29A4Q7RTT9 530 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms