RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 GRINAQ7Z429 371 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 FAM181AQ8N9Y4 354 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ING1Q9UK53 422 aaPredicted RBP13.36□□□□□ -0.27
NUP50-201ENST00000347635 NUDT19A8MXV4 375 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 OGG1O15527 345 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 IFNA2P01563 188 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 PRICKLE4Q2TBC4 344 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 AKR1C8PQ5T2L2 129 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 H3F3CQ6NXT2 135 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 GLIPR1L1Q6UWM5 242 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ANGPTL5Q86XS5 388 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 NRSN2Q9GZP1 204 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 FAM230AA0A1W2PPH8 454 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 HYAL3O43820 417 aaPredicted RBP13.36□□□□□ -0.27
NUP50-201ENST00000347635 AQP8O94778 261 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ST6GAL1P15907 406 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 TCN2P20062 427 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 HMGN3Q15651 99 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 TMEM92Q6UXU6 159 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 TMPPEQ6ZT21 453 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ZNF695Q8IW36 515 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 NAXDQ8IW45 347 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 TMEM229BQ8NBD8 167 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 GPBAR1Q8TDU6 330 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 S1PR5Q9H228 398 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ZNF629Q9UEG4 869 aaPredicted RBP13.36□□□□□ -0.27
NUP50-201ENST00000347635 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 BCL2L11O43521 198 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 LILRB5O75023 590 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 PPT1P50897 306 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 SLC25A1P53007 311 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 VN1R4Q7Z5H5 301 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 TMEM200AQ86VY9 491 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 OR4D9Q8NGE8 314 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 PTP4A1Q93096 173 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 SPIN2AQ99865 258 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 SPIN2BQ9BPZ2 258 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 RPH3AQ9Y2J0 694 aaPredicted RBP13.36□□□□□ -0.27
NUP50-201ENST00000347635 OR6C68A6NDL8 312 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 IDSB3KWA1 339 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 SGCEO43556 437 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 RRASP10301 218 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 FKBP2P26885 142 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 AKR1C2P52895 323 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CRYBA2P53672 197 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 BAMBIQ13145 260 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CNN3Q15417 329 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 LGALSLQ3ZCW2 172 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 TSEN54Q7Z6J9 526 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 FAM212BQ9NTI7 297 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 ZNF254O75437 659 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 LCATP04180 440 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CHRM2P08172 466 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CPN1P15169 458 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 ZNF74Q16587 644 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 HLA-BQ31612 363 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 SIGLEC11Q96RL6 698 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 KCNJ15Q99712 375 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 WFDC6Q9BQY6 131 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 ARRDC1-AS1Q9H2J1 176 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 SERGEFQ9UGK8 458 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 C7orf66A4D0T2 115 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 ERVH48-1M5A8F1 160 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 SLC17A2O00624 439 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 COL9A1P20849 921 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 EIF1P41567 113 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 PPICP45877 212 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 S100A12P80511 92 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 KLF9Q13886 244 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 KIAA0907Q7Z7F0 614 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 MTFP1Q9UDX5 166 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 WIF1Q9Y5W5 379 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 FCGR2AP12318 317 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 KIR2DL1P43626 348 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 UBE2IP63279 158 aaKnown RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 MALLQ13021 153 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 LYG2Q86SG7 212 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 OR1M1Q8NGA1 313 aa13.35□□□□□ -0.27
NUP50-201ENST00000347635 UBL7Q96S82 380 aaPredicted RBP13.35□□□□□ -0.27
NUP50-201ENST00000347635 H3BUI4 141 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 CTSVO60911 334 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 ICOSLGO75144 302 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 POU3F2P20265 443 aaPredicted RBP13.34□□□□□ -0.27
NUP50-201ENST00000347635 GDF1P27539 372 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 SERPINF1P36955 418 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 EDEM2Q9BV94 578 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 PIGBOS1A0A0B4J2F0 54 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 ARPC3O15145 178 aa13.34□□□□□ -0.27
NUP50-201ENST00000347635 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms