RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 LDLRAD4O15165 306 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 IL5P05113 134 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 GTF2F2P13984 249 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 CPN1P15169 458 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 KLK2P20151 261 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 PRSS3P35030 304 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 MFAP5Q13361 173 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 MOGAT2Q3SYC2 334 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 THOC7Q6I9Y2 204 aaKnown RBP13.76□□□□□ -0.21
UPF3B-202ENST00000345865 MRPL14Q6P1L8 145 aaKnown RBP13.76□□□□□ -0.21
UPF3B-202ENST00000345865 OR51S1Q8NGJ8 323 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 OR8S1Q8NH09 359 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 GPX8Q8TED1 209 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 FAM206AQ9NX38 181 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 CYB5R1Q9UHQ9 305 aa13.76□□□□□ -0.21
UPF3B-202ENST00000345865 RPH3AQ9Y2J0 694 aaPredicted RBP13.76□□□□□ -0.21
UPF3B-202ENST00000345865 IGLV3-32A0A0A0MS00 114 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 A0A1W2PNV4 684 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 RAMP1O60894 148 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 HRGP04196 525 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 CELA2AP08217 269 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 CSF1P09603 554 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 ZNF28P17035 718 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 ACHEP22303 614 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 DNASE1L1P49184 302 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 C2orf68Q2NKX9 166 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 SPICQ8N5J4 248 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 OR2M3Q8NG83 312 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 OR4D6Q8NGJ1 314 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 SEH1LQ96EE3 360 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 CMKLR1Q99788 373 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 DPCDQ9BVM2 203 aaPredicted RBP13.75□□□□□ -0.21
UPF3B-202ENST00000345865 ZMAT3Q9HA38 289 aaKnown RBP13.75□□□□□ -0.21
UPF3B-202ENST00000345865 PILRBQ9UKJ0 227 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
UPF3B-202ENST00000345865 TTRP02766 147 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 ACSM4P0C7M7 580 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 MMP16P51512 607 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 RBMS2Q15434 407 aaKnown RBP13.75□□□□□ -0.21
UPF3B-202ENST00000345865 DEGS2Q6QHC5 323 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 JAGN1Q8N5M9 183 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 MEIOBQ8N635 442 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 WDSUB1Q8N9V3 476 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 OR6M1Q8NGM8 313 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 SLAMF6Q96DU3 332 aa13.75□□□□□ -0.21
UPF3B-202ENST00000345865 SLC22A5O76082 557 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 ANOS1P23352 680 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 MSX1P28360 303 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 PMS2CLQ68D20 193 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 CFAP77Q6ZQR2 320 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 FTMTQ8N4E7 242 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 FGGYQ96C11 551 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 CHST6Q9GZX3 395 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 SLC26A1Q9H2B4 701 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 TAS2R8Q9NYW2 309 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 LOC390937A0A1W2PQ73 354 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 OR2M5A3KFT3 312 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 SNRPGP15A8MWD9 76 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 AKAIN1P0CW23 69 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 GABRA1P14867 456 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 ZNF24P17028 368 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 ENPP1P22413 925 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 CDAP32320 146 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 PSMA6P60900 246 aaKnown RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 UBE2MP61081 183 aaKnown RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 ZNF704Q6ZNC4 412 aaPredicted RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 GPAT4Q86UL3 456 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 SPACA9Q96E40 222 aaPredicted RBP13.74□□□□□ -0.21
UPF3B-202ENST00000345865 LHFPL6Q9Y693 200 aa13.74□□□□□ -0.21
UPF3B-202ENST00000345865 TRAF3IP2O43734 574 aaPredicted RBP13.73□□□□□ -0.21
UPF3B-202ENST00000345865 OR2A4O95047 310 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 PGA4P0DJD7 388 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 PGA3P0DJD8 388 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 OR3A3P47888 321 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 SNTA1Q13424 505 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 C1orf100Q5SVJ3 147 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 TMEM244Q5VVB8 128 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 STEAP1BQ6NZ63 245 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 ZNF813Q6ZN06 617 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 ADAT3Q96EY9 351 aaPredicted RBP13.73□□□□□ -0.21
UPF3B-202ENST00000345865 RBP7Q96R05 134 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 OR5B2Q96R09 309 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 DEFB126Q9BYW3 111 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 SDHAF3Q9NRP4 125 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 B3GNT2Q9NY97 397 aa13.73□□□□□ -0.21
UPF3B-202ENST00000345865 CHCHD2Q9Y6H1 151 aaPredicted RBP13.73□□□□□ -0.21
UPF3B-202ENST00000345865 SDK2Q58EX2 2172 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms