RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SYT9Q86SS6 491 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 LSRQ86X29 649 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-201ENST00000345617 DYNLRB1Q9NP97 96 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 EXOSC7Q15024 291 aaKnown RBP17.78■□□□□ 0.44
HDAC4-201ENST00000345617 OR8B8Q15620 311 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 MFSD4AQ8N468 514 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 FCGR2CP31995 323 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 EVX1P49640 407 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 SLC38A9Q8NBW4 561 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 LKAAEAR1Q8TD35 194 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 OR5M11Q96RB7 305 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 WDR61Q9GZS3 305 aaKnown RBP17.78■□□□□ 0.44
HDAC4-201ENST00000345617 PARD6AQ9NPB6 346 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 SLC17A5Q9NRA2 495 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 CD70P32970 193 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 RELL2Q8NC24 303 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-201ENST00000345617 TRBV11-1A0A0K0K1C0 115 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 J3KTA2 159 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 ZFP62Q8NB50 900 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-201ENST00000345617 TEAD1P28347 426 aa17.78■□□□□ 0.44
HDAC4-201ENST00000345617 ABCD4O14678 606 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 YIF1AO95070 293 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 RHOUQ7L0Q8 258 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 THNSL2Q86YJ6 484 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 TMED6Q8WW62 240 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 TRAV1-2A0A0B4J238 106 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 THEM4Q5T1C6 240 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 BOD1Q96IK1 185 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 EGLN1Q9GZT9 426 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 ISL1P61371 349 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 ERHP84090 104 aaKnown RBP17.77■□□□□ 0.44
HDAC4-201ENST00000345617 C1orf220Q5T0J3 134 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 KCNE4Q8WWG9 221 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 FUNDC1Q8IVP5 155 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 A0A1W2PPQ1 181 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 ADRA1AP35348 466 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 KRTDAPP60985 99 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 UBE2IP63279 158 aaKnown RBP17.77■□□□□ 0.44
HDAC4-201ENST00000345617 SMIM4Q8WVI0 70 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 LYRM4Q9HD34 91 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 BCORQ6W2J9 1755 aa17.77■□□□□ 0.44
HDAC4-201ENST00000345617 PRSS38A1L453 326 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 G0S2P27469 103 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 SSR4P51571 173 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 RRADP55042 308 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 PNRC1Q12796 327 aaPredicted RBP17.77■□□□□ 0.43
HDAC4-201ENST00000345617 DRGXA6NNA5 263 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 CNMDO75829 334 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 GDF1P27539 372 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 TMEM88Q6PEY1 159 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 SLC39A7Q92504 469 aa17.77■□□□□ 0.43
HDAC4-201ENST00000345617 RAB27BO00194 218 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 SHHQ15465 462 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 ZFPM2Q8WW38 1151 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 LIPHQ8WWY8 451 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 NMNAT3Q96T66 252 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 WWTR1Q9GZV5 400 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 FABP9Q0Z7S8 132 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 SYPL1Q16563 259 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 MMACHCQ9Y4U1 282 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 RNASEK-C17orf49H0YIS7 233 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 HCRTO43612 131 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 CNIH1O95406 144 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 PELI3Q8N2H9 469 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 HSPB6O14558 160 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 ACOT8O14734 319 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 TCN2P20062 427 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 GPR12P47775 334 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 ANGPTL5Q86XS5 388 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 PIANPQ8IYJ0 282 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 SYS1Q8N2H4 156 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 ARHGEF39Q8N4T4 335 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 CNEP1R1Q8N9A8 125 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 OR52E1Q8NGJ3 308 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 C16orf70Q9BSU1 422 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 NSG1A0A0A6YYJ2 146 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 TAZQ16635 292 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 GDPD3Q7L5L3 318 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 SHARPINQ9H0F6 387 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 BIDP55957 195 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 GATCO43716 136 aaKnown RBP17.76■□□□□ 0.43
HDAC4-201ENST00000345617 ERVFC1-1P60608 527 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 TOMM20LQ6UXN7 152 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 TMEM64Q6YI46 380 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 OR2M7Q8NG81 312 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 MAP6Q96JE9 813 aa17.76■□□□□ 0.43
HDAC4-201ENST00000345617 FAM103A1Q9BTL3 118 aaKnown RBP17.76■□□□□ 0.43
HDAC4-201ENST00000345617 BARX1Q9HBU1 254 aaPredicted RBP17.75■□□□□ 0.43
HDAC4-201ENST00000345617 IFITM5A6NNB3 132 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 HSD17B6O14756 317 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 CEBPEQ15744 281 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 GRAMD2AQ8IUY3 354 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 OR10P1Q8NGE3 313 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 A6NDN8 102 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 TERTO14746 1132 aaKnown RBP17.75■□□□□ 0.43
HDAC4-201ENST00000345617 DEDDO75618 318 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 AKIP1Q9NQ31 210 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 VAMP5O95183 116 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 ADPRHP54922 357 aa17.75■□□□□ 0.43
HDAC4-201ENST00000345617 ZNF628Q5EBL2 1059 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms