RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TRIM15Q9C019 465 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 SHARPINQ9H0F6 387 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 MUC13Q9H3R2 512 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 FN3KQ9H479 309 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 MAGIXQ9H6Y5 334 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
HMGN3-202ENST00000344726 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
HMGN3-202ENST00000344726 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
HMGN3-202ENST00000344726 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
HMGN3-202ENST00000344726 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ACOT8O14734 319 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 RER1O15258 196 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ABHD16AO95870 558 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 GASTP01350 101 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 DBHP09172 617 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 CRABP1P29762 137 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 GCH1P30793 250 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 CHN2P52757 468 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 HIST1H3AP68431 136 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 MRPS11P82912 194 aaKnown RBP12.28□□□□□ -0.44
HMGN3-202ENST00000344726 SRSF2Q01130 221 aaKnown RBP12.28□□□□□ -0.44
HMGN3-202ENST00000344726 CLEC12AQ5QGZ9 265 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 SLC35F1Q5T1Q4 408 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 HIST2H3AQ71DI3 136 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
HMGN3-202ENST00000344726 JAZF1Q86VZ6 243 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 OR8D4Q8NGM9 314 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 CCDC124Q96CT7 223 aaKnown RBP12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ASB9Q96DX5 294 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 C1orf159Q96HA4 380 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 ELOVL3Q9HB03 270 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 RPRD1BQ9NQG5 326 aaKnown RBP12.28□□□□□ -0.44
HMGN3-202ENST00000344726 NKIRAS2Q9NYR9 191 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 PLEK2Q9NYT0 353 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 GPR160Q9UJ42 338 aa12.28□□□□□ -0.44
HMGN3-202ENST00000344726 BHLHE40O14503 412 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CDC14BO60729 498 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 TFP02787 698 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CENPAP49450 140 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 ZNF81P51508 661 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CDH15P55291 814 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 PSG7Q13046 419 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.45
HMGN3-202ENST00000344726 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CR1LQ2VPA4 569 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 PCGF3Q3KNV8 242 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 SPRNQ5BIV9 151 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 ZNF362Q5T0B9 420 aaPredicted RBP12.27□□□□□ -0.45
HMGN3-202ENST00000344726 OR2T5Q6IEZ7 315 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CORO6Q6QEF8 472 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 ZBTB46Q86UZ6 589 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 SLC26A10Q8NG04 563 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 OR2T29Q8NH02 315 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 OR1F12Q8NHA8 337 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CLDND2Q8NHS1 167 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 HPS1Q92902 700 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 DDOQ99489 341 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 THTPAQ9BU02 230 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 LPAR3Q9UBY5 353 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 KLHL21Q9UJP4 597 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 STARD10Q9Y365 291 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 GRIP1Q9Y3R0 1128 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CACNG2Q9Y698 323 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 CDH10Q9Y6N8 788 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 U3KQV3 271 aa12.27□□□□□ -0.45
HMGN3-202ENST00000344726 FAM157AC9JC47 383 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 H3BSA7 217 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 SPRY3O43610 288 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 IDH3BO43837 385 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 UBOX5O94941 541 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 CCNB2O95067 398 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 RENP00797 406 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 IFNA2P01563 188 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 NOS3P29474 1203 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 CRYBB2P43320 205 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 ERFP50548 548 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 ARHGDIAP52565 204 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 TMEM33P57088 247 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGN3-202ENST00000344726 MOGQ16653 247 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
HMGN3-202ENST00000344726 DNM1P34Q6PK57 102 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 UNQ6126/PRO20091Q6UXV3 157 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 RASSF6Q6ZTQ3 369 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 USP51Q70EK9 711 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms