RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 NBEAL1Q6ZS30 2694 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 ZSCAN5BA6NJL1 495 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 IMPA2O14732 288 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SNX3O60493 162 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 PTP4A3O75365 173 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 VENTXO95231 258 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 GADD45GO95257 159 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 MPZL1O95297 269 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 EPHA1P21709 976 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 TNFSF4P23510 183 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 CPT2P23786 658 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 FPR2P25090 351 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SDHAP31040 664 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 MSX2P35548 267 aaPredicted RBP10.54□□□□□ -0.72
SGCA-202ENST00000344627 OMPP47874 163 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 MMP15P51511 669 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SMIM11AP58511 58 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 MXRA7P84157 204 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SEC23BQ15437 767 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 MTX3Q5HYI7 312 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 FAM122BQ7Z309 247 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 C1QL2Q7Z5L3 287 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 ZER1Q7Z7L7 766 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 PEG10Q86TG7 708 aaKnown RBP10.54□□□□□ -0.72
SGCA-202ENST00000344627 FAM86B1Q8N7N1 296 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.54□□□□□ -0.72
SGCA-202ENST00000344627 C3orf56Q8N813 242 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 GCDHQ92947 438 aaPredicted RBP10.54□□□□□ -0.72
SGCA-202ENST00000344627 PYURFQ96I23 114 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 C7orf34Q96L11 122 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 GAL3ST1Q99999 423 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SYT4Q9H2B2 425 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 ZMAT3Q9HA38 289 aaKnown RBP10.54□□□□□ -0.72
SGCA-202ENST00000344627 G6PC2Q9NQR9 355 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 ASH2LQ9UBL3 628 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 ZDHHC8Q9ULC8 765 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 WIPI2Q9Y4P8 454 aa10.54□□□□□ -0.72
SGCA-202ENST00000344627 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 PPP1R3DO95685 299 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 ADH4P08319 380 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 COX5BP10606 129 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 GYS2P54840 703 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 GNGT1P63211 74 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 TNFAIP6P98066 277 aaPredicted RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 PSG7Q13046 419 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 AQP6Q13520 282 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 SMARCD3Q6STE5 483 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 VASH1Q7L8A9 365 aaPredicted RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 JAZF1Q86VZ6 243 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 NPEPL1Q8NDH3 523 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 OR2Z1Q8NG97 314 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 FANK1Q8TC84 345 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 SLC7A6Q92536 515 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 CMBLQ96DG6 245 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 NSMCE2Q96MF7 247 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 ERMAPQ96PL5 475 aaPredicted RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 DCLRE1CQ96SD1 692 aaKnown RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 CDRT15Q96T59 188 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 NUAK2Q9H093 628 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 POFUT1Q9H488 388 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 GORASP2Q9H8Y8 452 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 SRA1Q9HD15 236 aaKnown RBP10.53□□□□□ -0.72
SGCA-202ENST00000344627 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 TBCCD1Q9NVR7 557 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 MAGEL2Q9UJ55 1249 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 TMCC3Q9ULS5 477 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 STARD10Q9Y365 291 aa10.53□□□□□ -0.72
SGCA-202ENST00000344627 OR10H3O60404 316 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 ICMTO60725 284 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 RGS9O75916 674 aaPredicted RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 GPANK1O95872 356 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 RENP00797 406 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 SBK2P0C263 348 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 ADRA2CP18825 462 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 NOS3P29474 1203 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 CRABP1P29762 137 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 SLC6A6P31641 620 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 IFNGR2P38484 337 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 CDKN2AP42771 156 aaKnown RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 LSM6P62312 80 aaKnown RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 DCAF12L2Q5VW00 463 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 LEG1Q6P5S2 330 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 DNM1P34Q6PK57 102 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 PTCHD4Q6ZW05 846 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 ADCK1Q86TW2 530 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 OR1F12Q8NHA8 337 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 TSSK2Q96PF2 358 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 IFT27Q9BW83 186 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 PLA2G12AQ9BZM1 189 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
SGCA-202ENST00000344627 PURGQ9UJV8 347 aaKnown RBP10.52□□□□□ -0.73
SGCA-202ENST00000344627 RER1O15258 196 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 PLPP2O43688 288 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 DEAF1O75398 565 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms