RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 RAB11AP62491 216 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 PPP2CBP62714 309 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
KPNA1-201ENST00000344337 PPP2CAP67775 309 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 C19orf57Q0VDD7 668 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 TAF9Q16594 264 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 IRAK1BP1Q5VVH5 260 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 RAB11FIP2Q7L804 512 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 OR51A2Q8NGJ7 313 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 STT3BQ8TCJ2 826 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 DNTTIP1Q9H147 329 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 OR52A5Q9H2C5 316 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 C11orf49Q9H6J7 331 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 GNG13Q9P2W3 67 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 CTSFQ9UBX1 484 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 GPR160Q9UJ42 338 aa7.1□□□□□ -1.27
KPNA1-201ENST00000344337 XRCC3O43542 346 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 UTS2O95399 124 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 FPR3P25089 353 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ZNF93P35789 620 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 EFNB2P52799 333 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PRPS1P60891 318 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 DCAF12L2Q5VW00 463 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SSX9Q7RTT3 188 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 MRPL43Q8N983 215 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 OR1S1Q8NH92 325 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ZNF587Q96SQ5 575 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 MRPS28Q9Y2Q9 187 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 P2RX6O15547 441 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 IGLV3-27P01718 113 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GLRA1P23415 457 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 CLDN17P56750 224 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 RPL18Q07020 188 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 CBLN3Q6UW01 205 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 MOB3CQ70IA8 216 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ZNF547Q8IVP9 402 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 CDH26Q8IXH8 852 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 OR13H1Q8NG92 308 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ZPLD1Q8TCW7 415 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 KTI12Q96EK9 354 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PBDC1Q9BVG4 233 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GABARAPL1Q9H0R8 117 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PELI2Q9HAT8 420 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GPR173Q9NS66 373 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 STEAP1Q9UHE8 339 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PADI1Q9ULC6 663 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SRPK3Q9UPE1 567 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 RCL1Q9Y2P8 373 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 AMDHD2Q9Y303 409 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 NYNRINQ9P2P1 1898 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SPTBN5Q9NRC6 3674 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 COL4A5P29400 1685 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 KCNE1BA0A087WTH5 132 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 TRBV11-1A0A0K0K1C0 115 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GPR37O15354 613 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 TUSC2O75896 110 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 EML2O95834 649 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GABRG1Q8N1C3 465 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 UQCC2Q9BRT2 126 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 TMEM59Q9BXS4 323 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 CYSLTR2Q9NS75 346 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ACAD8Q9UKU7 415 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SERINC4A6NH21 518 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 GCM2O75603 506 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 ONECUT2O95948 504 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PATE4P0C8F1 98 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 TSFMP43897 325 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 HTRA4P83105 476 aaPredicted RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 METRNLQ641Q3 311 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 Q6ZRG5 221 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 TPRA1Q86W33 373 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SLC25A32Q9H2D1 315 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 PATZ1Q9HBE1 687 aaKnown RBP7.09□□□□□ -1.27
KPNA1-201ENST00000344337 NPFFR2Q9Y5X5 522 aa7.09□□□□□ -1.27
KPNA1-201ENST00000344337 SHISA3A0PJX4 238 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 SULT2B1O00204 365 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 CDK2AP1O14519 115 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 OR2C1O95371 312 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.28
KPNA1-201ENST00000344337 MMP7P09237 267 aaPredicted RBP7.09□□□□□ -1.28
KPNA1-201ENST00000344337 NID1P14543 1247 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 SDHAP31040 664 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 ELAVL1Q15717 326 aaKnown RBP7.09□□□□□ -1.28
KPNA1-201ENST00000344337 ADIRFQ15847 76 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 SPINK9Q5DT21 86 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 TMEM65Q6PI78 240 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 UEVLDQ8IX04 471 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 LSMEM1Q8N8F7 131 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 OR2A1Q8NGT9 310 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 RXFP4Q8TDU9 374 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 CRLF2Q9HC73 371 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 POLMQ9NP87 494 aaPredicted RBP7.09□□□□□ -1.28
KPNA1-201ENST00000344337 POMT2Q9UKY4 750 aa7.09□□□□□ -1.28
KPNA1-201ENST00000344337 PAPPAQ13219 1627 aa7.08□□□□□ -1.28
KPNA1-201ENST00000344337 TEX51A0A1B0GUA7 166 aa7.08□□□□□ -1.28
KPNA1-201ENST00000344337 PTAFRP25105 342 aa7.08□□□□□ -1.28
KPNA1-201ENST00000344337 BLKP51451 505 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms